| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2507 |
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| Symbol | |
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| ID | 6111460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2787753 |
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| End bp | 2789573 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622302 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001749376 |
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| Protein GI | 170721688 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0116993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG AACTGCTGCC CTACTACGAA AAGGAACTGT CGCACCTGCG CTTCCTCGGC
CAGGAGTTTG CTGCGCAGTA CCCGAAAATC GCCTCGCGGC TGCTGATCGA GGGCGACAAC
TGTGAGGACC CGCATACCGA GCGCCTGATC GAGGCGTTCT CGTTCCTCTC GGCGCGGGTG
CACAAAAAGC TCGATGACGA GTTCCCGGAG ATTGTCGAGT CGTTCCTTGA GGTGCTGTAC
CCGCACTACC TGCGCCCTAC CCCGTCGATG TCGATCGCCG AGCTTAGCCT TGGCAAGCAG
GAGAAGGTCA CCGAAGCCTA CCGCGTGGCG CGGCACACCG AGATGCATGC CAATGCCGTT
GAAGGCGTGG TTTGCAAGTT CCGCACCTGC TACCCGGTGG AGCTGTGGCC GGTTGCCGTG
CAGCAGGCCT CGTTCACCGA GATGGAACGC TCGGCCTTCA ACGGCCACAG CGCCGATCTG
GTGGCGCGCT TGCGCATCCG CCTGCAAGCC ACCGGCGACG TCTTGTTCGG CCAGATGGAG
CTTGACCGCC TGCGCTTCTT CCTCGACGGC GAAGCAACGC TGATGCACCA GCTCTACGAG
CTGCTGTTCA ACAACCTCGC CAAGGCCACA CTCAGCTTCC AGGACGAAGG CCGCAGCCGT
GAAGTCGCAC TGCCCGCCGG CGCCCTGAAA GCGGTGGGTT ATGCCCGCGA CGAAGGTCTG
GTGGATTACT CCGAGCGCTC GTTCCTCGGT TACCGCCTGC TGCACGAGTA CTTCACGTTC
CCCGACAAAT TCATGTTCTT CGACCTCTCA GGTTTTGCCC GCATCCTGCA GGGCAAGGCC
ATCGAGCAGG TCGAGATCAA CTTCTACTTC AACGATTACG ACCTCAGCGA GCGCCTGGCG
CGGCTGGCCC AGAACATCGG GCGCAACAAT TTCAAGCTCA ACTGCACGCC GATCATCAAC
CTGTTCCGCC AGCAGGCCGA GCCGATCAAG CTCACCCACA CCCAGCACGA ATACCCGGTC
ACCCCGGACA TTCGCCTGCA CAACGCGGCG GAAGTGGTGT CGATCGACCG GGTGCGGCGC
GTACGCAAGC TCGGTGGCAT CGACCACGTC GGCACCTGCC AGCCGTTCTT CGAGCCGCGT
GGCGAGCAAG ACCCGCACAA CAGCTTCTGG ATTGCCCGCC GGCGCAACCA GGGCGATGCC
ACGGCGATGA GCATCCGCGT GGTCGACCGC GACCTGGAGC TGATCGACGG CACCAGCGAC
ACCCTGAGCA TCAGCCTGAC CTGCAGCAAC CGTGATGTAC CCCTGCTGCT GCCGTTCGGT
GGCGAGCGCG GTGATTTCAA CATCCCGGCC AACTCGGTGA TCAAAGACAT CCGCTGCCTG
CGCAAGCCCA CCGCCACGGT GCGCGTCCCG CTGGGCAAAG GCCTGATCTG GCGGCTGATC
GCGCACCTGT CGCTCAACCA CCTGTCGCTG GTGAGCCAGG GCCGCGAAGT GCTGCTCGAG
CTGCTGTCGC TTTACAACTA CCGCAACGTC TCGGCCATCC GCAAACAGAT CAACGGCATC
AAGGCAATCA GCAGCGAGCC GGTGGTAGCG CGCATCGGCC ACCCGCGGCC GAATTTCGTG
CGCGGCGTGG GCATCACCCT GACCTTCGAC GAAAGCCAGT TCACCGGTAG CGGCGTGTTC
CTGTTCGGCA TGGTGCTGGA CCACTTCTTT GGCCAGTACT GCTCGATGAA CAGCTTCACC
CAACTGACCC TGCGTACCCA ACAACGAGAA AAGAGAGTCG TCCAATGGCC AGCACGTACT
GGCGATCAGC CCCTGGTCTG A
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| Protein sequence | MLDELLPYYE KELSHLRFLG QEFAAQYPKI ASRLLIEGDN CEDPHTERLI EAFSFLSARV
HKKLDDEFPE IVESFLEVLY PHYLRPTPSM SIAELSLGKQ EKVTEAYRVA RHTEMHANAV
EGVVCKFRTC YPVELWPVAV QQASFTEMER SAFNGHSADL VARLRIRLQA TGDVLFGQME
LDRLRFFLDG EATLMHQLYE LLFNNLAKAT LSFQDEGRSR EVALPAGALK AVGYARDEGL
VDYSERSFLG YRLLHEYFTF PDKFMFFDLS GFARILQGKA IEQVEINFYF NDYDLSERLA
RLAQNIGRNN FKLNCTPIIN LFRQQAEPIK LTHTQHEYPV TPDIRLHNAA EVVSIDRVRR
VRKLGGIDHV GTCQPFFEPR GEQDPHNSFW IARRRNQGDA TAMSIRVVDR DLELIDGTSD
TLSISLTCSN RDVPLLLPFG GERGDFNIPA NSVIKDIRCL RKPTATVRVP LGKGLIWRLI
AHLSLNHLSL VSQGREVLLE LLSLYNYRNV SAIRKQINGI KAISSEPVVA RIGHPRPNFV
RGVGITLTFD ESQFTGSGVF LFGMVLDHFF GQYCSMNSFT QLTLRTQQRE KRVVQWPART
GDQPLV
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