| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2505 |
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| Symbol | |
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| ID | 6111458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2784125 |
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| End bp | 2786722 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641622300 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001749374 |
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| Protein GI | 170721686 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.58674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGA AGTCTCTGTT CGCCAAGCTT AACGAAACCA GCCGCACGGC CACTGAAAGC
GCGGCGGCCC TGTGCCTGTC GGAGCACCAC TACGACGTCG AGGTGGAACA CCTGCTGCTG
CAGTTGCTGG ACAACAGCGA CAGTGACCTG CCGCTGATCC TGCGCCACTA CGACGTGGTC
GCCGAGCGCC TGCAGGCGCA ACTGGTGACC GCCCTGGGTA CCTTCAAGAA GGGCAACACC
CGCACCCCGG CGCTGTCCCC GCACATCACC CGCATGATCG AGCAGGCATG GGTACTGGCC
TCGATCGAGT ATGGTGTGGG CCAGGTGCGC AGTGCGCACC TGTTGCAAGC ATTGCTCGAC
GACGCCGAAC TGCGCCGGGT GGTCATCGCC TCCGCACCGG AGCTTGAGAA GATCAACGCC
GACGACCTGC GCCTGAACCT CAGCGCACTG GTCGAAGGCA GTGCCGAATC CCGGCTCGCC
AGCCCTCTGG CCAGCCCCTC GGCGCCAGTG GCAGGCGCCG GCAAGGTTGG CGGCAAGACC
CCGGCCCTGG ACCAGTACAC CGTCAACCTC ACACAAAGCG CCCGTGACGG CCGGATCGAC
CCGGTGCTTG GCCGCGAGTT CGAAGTGCGG CAGATGGTCG ACATCCTCAC CCGTCGCCGC
CAGAACAACC CGATCCTCAC CGGCGAAGCC GGCGTCGGCA AGACCGCAGT GGTCGAAGGC
CTGGCCTTGC GCATCGCCCA GGGCGATGTG CCAGCCCCAC TCAAGGACGT CGCCGTGCAC
ACCCTCGACC TGGGCCTGCT GCAGGCGGGT GCCGGGGTCA AGGGCGAGTT CGAAAACCGC
CTCAAAGCGG TGATCGAAGA GGTCAAGCGC AGCCTGCACC CGATCATCCT GTTCATCGAC
GAAGCCCACA CCCTGATCGG CTCCGGTGGC CAGGCCGGGC AGAACGATGC CGCGAACCTG
CTCAAGCCAG CCCTGGCCCG TGGCGAGCTG CGCACCATCG CTGCCACCAC CTGGGCCGAA
TACAAGAAGT ACTTCGAAAA AGACGCCGCC CTCGCCCGTC GCTTCCAGGT AGTCAAGGTC
GAAGAGCCTG ACGAAGACAA GGCCATCCAC ATGCTGCGCG GCCTGCTCGG CAAGATGCGC
GAGCACCACA AGGTGGCGGT GATGGACGAA GCACTGGTAC AGGCCGTGCG CCTGTCCAAC
CGCTACATCA CCGGCCGCCA GCTGCCCGAC AAGGCGGTCA GCGTGCTCGA TACCGCCTGC
GCACGCATCG CCTTGGCGCA GTCGTCGCAA CCCGGCGCGC TGGAAGACTG CCGCCGCCAT
ATCGACAACC TGCAGGCCGA AATCGCCGTG CTCGACCACG AAGCCGGCAA GGGCCACGAC
CATGCCCGGC GCCTTGCCGA GCTGCAGGCC GCCCTGCAGG CCGAGCAGTC GCACGAACAG
CGCCTGAGCG CCCAGTGGCA GCAGGAGCTG GGCCTGGTCG AGCAACTCAA AGCCCTGGAC
AGCGCCAAGG ACACCGACGC CGCCCAGCTC AACGCCCTGC GCGCCGAGCT GAGCGCCGTC
CAGGGCGACC AGCCCCTGGT CCACGCCTTG GTCGATGCCG GCGCCATCGC CCAGGTGATC
AGCGGCTGGA CCGGTATCCC GCTGGGCAAG ATGCTGCGTG ACGAGATCGA CACCGTGCAG
CGCCTGCCTG CGCTGCTCGG TGAACGCGTG CTGGGCCAGG ACCACGCGCT GCACGAAATC
GGCAAGCGCA TCAAGATTTC CCGCGCCCGC ATGGAAGACC CAAACAAACC GATCGGCGTG
TTCCTGCTGC TGGGCCCCAG CGGCGTCGGC AAGACCGAAA CCGCGCTGGC ATTGGCCGAC
ACCCTGTACG GCGGTGAGCG CAACCTGATC ACCATCAACA TGTCCGAGTA CCAGGAGGCC
CACACCGTAT CGAGCCTCAA AGGCTCGCCA CCCGGCTACG TCGGTTACGG CGAAGGCGGC
GTGCTGACCG AGGCCGTGCG CCGCAAGCCC TACAGCGTGG TGCTGCTCGA CGAGGTGGAG
AAGGCCCACC CCGACGTGCT CGAGCTGTTC TTCCAGGTGT TCGACAAAGG CGTGCTGGAC
GACGGCGAAG GCCGCGAGAT CAACTTCCGC AACACGGTGA TCATCCTCAC GTCCAACACC
GGCACCGAGC GCATCATGCA GACCTGCCTG AATGCCCAGA CGCTGCCTAC CCCCGAGGCC
ATCGTCGAAG GCCTGCGCGA CGAGCTGAAC CACGTCTTCA AACCGGCCTT CCTCGGCCGC
CTGAGCATCG TGCCGTTCTA CCCGGTGCAG GACCAGATCC TCGAGCGCAT CGTTGCCCTC
AAGCTCGAGC GTATCGCCAA ACGTTTCGCC CGCAACCACC AGGCTGAGCT GAGCTACGAC
GACGCCCTGG TCAAGGCCAT CGCGGCACGT TGCACCGAGG TCGACAGCGG CGCACGCAAC
ATCGACAACA TCCTGTCCCG CACCCTGATG CCCGAGCTTG CCCAGCACGT TCTCGAGCGC
ATGGCCCAGG ACGCGCCGAT CGAGCGCTTG ACGATCGAGC TGGGCAGCGA TGGCGATTTC
GCCTATCGCC TGGCCTGA
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| Protein sequence | MNLKSLFAKL NETSRTATES AAALCLSEHH YDVEVEHLLL QLLDNSDSDL PLILRHYDVV
AERLQAQLVT ALGTFKKGNT RTPALSPHIT RMIEQAWVLA SIEYGVGQVR SAHLLQALLD
DAELRRVVIA SAPELEKINA DDLRLNLSAL VEGSAESRLA SPLASPSAPV AGAGKVGGKT
PALDQYTVNL TQSARDGRID PVLGREFEVR QMVDILTRRR QNNPILTGEA GVGKTAVVEG
LALRIAQGDV PAPLKDVAVH TLDLGLLQAG AGVKGEFENR LKAVIEEVKR SLHPIILFID
EAHTLIGSGG QAGQNDAANL LKPALARGEL RTIAATTWAE YKKYFEKDAA LARRFQVVKV
EEPDEDKAIH MLRGLLGKMR EHHKVAVMDE ALVQAVRLSN RYITGRQLPD KAVSVLDTAC
ARIALAQSSQ PGALEDCRRH IDNLQAEIAV LDHEAGKGHD HARRLAELQA ALQAEQSHEQ
RLSAQWQQEL GLVEQLKALD SAKDTDAAQL NALRAELSAV QGDQPLVHAL VDAGAIAQVI
SGWTGIPLGK MLRDEIDTVQ RLPALLGERV LGQDHALHEI GKRIKISRAR MEDPNKPIGV
FLLLGPSGVG KTETALALAD TLYGGERNLI TINMSEYQEA HTVSSLKGSP PGYVGYGEGG
VLTEAVRRKP YSVVLLDEVE KAHPDVLELF FQVFDKGVLD DGEGREINFR NTVIILTSNT
GTERIMQTCL NAQTLPTPEA IVEGLRDELN HVFKPAFLGR LSIVPFYPVQ DQILERIVAL
KLERIAKRFA RNHQAELSYD DALVKAIAAR CTEVDSGARN IDNILSRTLM PELAQHVLER
MAQDAPIERL TIELGSDGDF AYRLA
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