| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2500 |
|---|
| Symbol | |
|---|
| ID | 6111453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2776582 |
|---|
| End bp | 2777490 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641622295 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001749369 |
|---|
| Protein GI | 170721681 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.399334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.740206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCT GCTTCGGCAA GCTGCCGTCG AGCGCAGACT TCGTCAGCCT GCATGGCGCG
GCGGAGGAAG TCTGCGAGTT CGACGCCTGG CTACAGGCCT CGTTGGCGGC AATGCGCCAC
CGCGAGGACT GGCAGGCGTT GTTCGATGCT CTGCCGATGT GCTTCTTCTG CTACCGCGCG
CGCAATGGCA ACTGGCTGCT GGGCGGCCTG CTCAGCTCCC GCGATGCCAG TGCCCGACGC
TACCCGTTCT TCATCTTCCA GCTGCTCAAG GGCCAAGAAG GTGAAACGCT GCTCAACCCG
TTCACCCTCG GCGAGCTGTT CAGTGCGCAA ATCAAGCCGT TGCTGCATCA GGCAGTGCAA
GGCGCCGAGC GCGCCAGCCT GTTCGAACGC ATCAAGGCCC TGCGCCCGCT GCAGGCCCAG
GACATGGACC TGTTCCGGCG TGTGTACAGC AAGTTCCTGC ATGATTTCAG CTTCAGCGAC
ATCGCCCGTG CGCTGAAGGG CTCCTGGCCG GCCTTCGACG GTGCTACCGC GCTGGCACGC
TTGCGGGCTA CGCAATTGGC GCTGCACGGC GACTTCGACG GCGGTATCGA GCTGCCGTTG
CCGGCCGAGC GTGGCCTGAA AAACCCCACC GCCGACCTGT GGCTGACCTG GCTGACGCGC
ATTGCCAGGC GCCATGACGT ACCAGCGGTA ACCTTGCTGG CCGACGATTT CATGCACCCG
CGGCTGTACT GCTTCCCGTC GCGCCATACC GGCACAGCGT ATCGCCTGCT CAGCGGCACG
GCCGCAGCCG GCCAACGCTT GGATCTGCTC AACCCGTTGC CGCCACAAAC GCCCGTGCAC
GACTACGACC GACCTCTAGA ACACGTCATC GACCGCTTTG TCGATGCGTT GGATGCGACG
CCTGTATGA
|
|---|
| Protein sequence | MIGCFGKLPS SADFVSLHGA AEEVCEFDAW LQASLAAMRH REDWQALFDA LPMCFFCYRA
RNGNWLLGGL LSSRDASARR YPFFIFQLLK GQEGETLLNP FTLGELFSAQ IKPLLHQAVQ
GAERASLFER IKALRPLQAQ DMDLFRRVYS KFLHDFSFSD IARALKGSWP AFDGATALAR
LRATQLALHG DFDGGIELPL PAERGLKNPT ADLWLTWLTR IARRHDVPAV TLLADDFMHP
RLYCFPSRHT GTAYRLLSGT AAAGQRLDLL NPLPPQTPVH DYDRPLEHVI DRFVDALDAT
PV
|
|---|
| |