| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2494 |
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| Symbol | |
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| ID | 6111447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2766757 |
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| End bp | 2767890 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641622289 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001749363 |
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| Protein GI | 170721675 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.359817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CAACCCGCAC AACCACCACC ACTGCCCTTG CCGAAACCCC GGAAGGCGCC
GCACCGCCCA GCGAACCGAC CAGCCCGGTG CGCACGCGAC GGGTGCGCAT CCTGTCTTCG
GTCATGTTCG CCTGCGTGGC TCTGGCCGGC ATCCTGCTGG TGCTCTATGC CTGGCGCCTG
CCGCCGTTCG GCAGTGCCAT CGAAAGTACC GAAAACGCCA TGGTACGCGG CCAGGTCACC
ATCATCGGGC CGCAACTGAG CGGCTATGTG GTCGATGTGC CTGTGCATGA CTTCCAGTTC
GTCAAGGCCG GCGACTTGCT GGTGCAACTG GACGACCGCA TCTACAAACA GCGCCTGGCC
CAGGCCATCG CCCAACTGCA ACAGGAGCAG GCGGCGCTGG CCAACAACCT GCAGCAGCGC
AATAGCGCCG AAGCCACCAT CGCCCAGCGC CAGGCCGCCA TTGGCGATGC CAAGGCCCAG
GCGGAAAAGG CCCGCGCCGA CCTCAGCCGC AACCAGGCGC TGGTCAGCGA TGGCTCGGTG
TCGCGCCGCG ACCTGGACGT TACCCGCGCC AGCCAGGCCG CCGCCGTCGC CACCCTCGCC
CAGGCCAAGG CCGCGCTGGC CATCGCCCGC CAGGACCGCG AGACGGTCAT CGTCAACCGC
GCCGCGCTGG AGGCCTCGGT TGAAAACGCC AAGGCTGCCG TGGAGCTGGC CCGCATCGAC
CTCGACAACA CCCGGGTCAC TGCGCCGCGT GATGGCCAGC TGGGGCAGAT CGGTACCCGC
CTGGGCGCTT ACGTCAACTC CGGCGCACAA CTGATGGCAC TGGTGCCCGA TACCGTGTGG
GTGATTGCCA ACATGAAGGA AACCCAGATG GCCGATGTGC GCATCGGCCA GCCGGTGACC
TTCACCGTGG ACGCCCTCAA CCACCTGAAG CTGCGGGGCC ATGTGCAGCA GATTTCACCG
GCCACAGGCT CCGAGTTCGC CTTGCTGCAG GCCGACAACG CCACCGGCAA CTTCGTCAAG
ATCGCCCAGC GGATACCCGT GCGGATCACC GTCGATGCCG ACCAGCCAGC GGCGAGGCGC
CTGAGCCCGG GGATGTCGGT GGTGGTGAGT ATCGATACCC GTGACGAAAA ATGA
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| Protein sequence | MTDPTRTTTT TALAETPEGA APPSEPTSPV RTRRVRILSS VMFACVALAG ILLVLYAWRL
PPFGSAIEST ENAMVRGQVT IIGPQLSGYV VDVPVHDFQF VKAGDLLVQL DDRIYKQRLA
QAIAQLQQEQ AALANNLQQR NSAEATIAQR QAAIGDAKAQ AEKARADLSR NQALVSDGSV
SRRDLDVTRA SQAAAVATLA QAKAALAIAR QDRETVIVNR AALEASVENA KAAVELARID
LDNTRVTAPR DGQLGQIGTR LGAYVNSGAQ LMALVPDTVW VIANMKETQM ADVRIGQPVT
FTVDALNHLK LRGHVQQISP ATGSEFALLQ ADNATGNFVK IAQRIPVRIT VDADQPAARR
LSPGMSVVVS IDTRDEK
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