| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2487 |
|---|
| Symbol | |
|---|
| ID | 6111440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2760478 |
|---|
| End bp | 2761314 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641622282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001749356 |
|---|
| Protein GI | 170721668 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization |
|---|
| TIGRFAM ID | [TIGR03214] putative allantoin catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0929015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATC ACTCCTACTT CGCCCCCCAC GGTGGGCACC CGGCTCAAAC CGAGCTGCTG
ACTGACCGTG CAATGTTCAC CGAAGCCTAT GCCGTCATTC CCAAAGGCGT GATGCGTGAC
ATCGTCACCA GCCACCTGCC GTTCTGGGAC AAGATGCGCA TGTGGGTCAT CGCCCGCCCA
CTCACCGGCT TTGCCGAAAC CTTCGCCCAG TACATCGTCG AAGTGGCCCC GGAAGGCGGC
AGCGAGCGTC CTGAACTGGA CCCCAATGCC GAAGCCGTCG TATTCGTCGT CGAAGGCGAA
ATCGACATCA CCGTCGAAGG CAAGCACCAC ACCCTGGGCC AGGGCGGTTA CGCATTCCTC
GCCCCGGGCG CCGAGTGGAG CCTGCGCAAC AACAGCAAGT CCAACGTCAC CTTCCACTGG
CTGCGCAAGC ACTACCAGAA GGTTGAAGGC CTGGATATCC CTGAGTCGTT CGTTACCCAC
CGCGACAACG CCACCGTCAT CGAAATGCCG GGTACCGAAG GCCGCTGGGT CACTACCCGC
TTCGTCGACA TGGCCGACAT GCGCCACGAC ATGCACGTCA ACATCGTGAC CTTCCAGCCG
GGCGGCGTGA TTCCGTTCGC TGAAACCCAC GTCATGGAAC ACGGCCTGTA CGTACTGGAA
GGCAAGGCGG TCTATCGCTT GAACCAGGAC TGGGTCGAAG TGGAAGCGGG CGACTTCATG
TGGCTGCGTG CATTCTGCCC GCAAGCCTGC TACGCAGGCG GCCCAGGCAA GTTCAGCTAC
CTGCTGTACA AAGACGTGAA CCGTCATGTG CACCTGACGC TGAACCCACA GCGTTAA
|
|---|
| Protein sequence | MSNHSYFAPH GGHPAQTELL TDRAMFTEAY AVIPKGVMRD IVTSHLPFWD KMRMWVIARP
LTGFAETFAQ YIVEVAPEGG SERPELDPNA EAVVFVVEGE IDITVEGKHH TLGQGGYAFL
APGAEWSLRN NSKSNVTFHW LRKHYQKVEG LDIPESFVTH RDNATVIEMP GTEGRWVTTR
FVDMADMRHD MHVNIVTFQP GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDFM
WLRAFCPQAC YAGGPGKFSY LLYKDVNRHV HLTLNPQR
|
|---|
| |