| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2468 |
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| Symbol | |
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| ID | 6111421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2745464 |
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| End bp | 2747341 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641622263 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001749337 |
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| Protein GI | 170721649 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.679634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.597766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT CGAAGTTGTG CAAGCCTGCT CCGTTCATGC TGCTGGCGCT CTGCGTGGCC
ATTGCCGGCT GCGGTTCGAG CGCGGTGCGC AAGGACAGCC AGGCGCTGAT GAAAGAAGGC
CAGTACGAGG CCGGTATCGC TCGCCTGGAA GAGGCGCTGC GCGACGACCC GCGTGACACC
GACCTGAACA TTGCGTTGGC CCAAGGCCGG CAGCAGGCGG TCGAGGCGCT GCTGAGCCAG
GCCGACAGCG ACCGCATCCG CCACGACTTC GCCGGTGCGC GCCTAGGTTA CGGCCGCGTG
CTCACCCTGG AACCGAACAA CCGCCGCGCG CATGAGGGCA TCCGCCAGCT GGAACTGATG
CGCACCCTCG ATGACCGTGT TGCGCTGGGC CAGGCTGCGC TGCGCCAGGG CGACCTGTTC
GGTGCCGAGC GTTACATGCG CGAAGTGCTG CGCCTGGACC CGCAAAACCA GAAGGGCATC
ATGCTGCGCA GCGATATCGA GAACGTCCAG GCCCGTACGG CACAGCCCTT CCCGCAACTG
CGCAGCAAGC TGGAGCGCCC GGTGACCCTG GAGTTTCGCG ATGCCGAGCT CAAGGTCATT
TTCGAAGTGC TGTCCCAGGT GGCCGGCATC AACTTCATTT TCGACAAGGA CCTGCGCCCG
GACATGAAGG CCACCATCTT CGTGCGCGAG GTGCGCATCG AGGATGCCAT AGCCCTGTTG
CTGGAACAGA ACCAGTTGCG CCAGAAGATC GTCAACGACA ACACCTTGCT GGTCTACCCC
GACTCGCCGC AGAAGACCAA GGACTACCAG GAACTGGTCA TGCGCACGTT CTACCTGACC
AGCATCGATG CCAACACCGC ACTGAACATG GTCAAGACCA TGCTCAAGAC CCGCGATGTA
TTCGTTGATG AGCGCCTCAA TACCCTGACC ATGCGCGACA CCCCAGACGC CGTGCGCATG
GCCGAGAAGC TGCTGCAGTC GCAGGACCAG TCCAACCCCG AGGTGGTGCT GGAAGTGGAG
GTGATGGAGG TGGCCCGCTC GCGCATCCTC GACCTTGGCC TGCAATGGCC CAATACCTTC
GGGGTGCTGA GCGATGAGGG CAACCCGGTC AGCGTGCTGG ACCAGTTGCG CGGCATCAAC
TCCGGGCGTA TCAGCATCTC GCCGGCGCCC CAGGCCAAGA TCAACGCCCA GGACAAGGAC
ATCAACACCC TGGCCAGTCC GGTGATACGC GTCAGCAACC GCGAGCAAGC GCGCATCCAC
ATCGGCCAGC GTGTGCCGAT CATCAGCGCC ACCTCGGTAC CTTCCACCCA AGGGCCGGTG
ATCACCGAAA GCGTCACCTA CCTGGATGTC GGTCTGAAGC TTGAAGTGCA GCCTACCGTG
CACCTGAACA ACGAGGTGGC GATCAAGGTA GCGCTTGAGG TCAGCAACGC CACCCCGCTG
GAGCCAACCC GCCAGGGCAC CATCCCGGTC CAGGTCGACA CCCGCAATGC CCAGACCAGC
CTGCGCCTGC ACGACGGCGA AACCCAGGTG CTGGCGGGGC TGGTGCGCAA CGACAAGACC
TCTAGCGGCA ACAAGATCCC GGGCCTGGGC GACATCCCTG GCCTGGGCCG GCTGTTCGGC
AGCAACCGCG ATGACATGAG CAAGTCCGAA CTGGTACTGG CGATCACCCC GCGGATCGTA
CGCAACCTGC CTTACCAGAG CCCCTCGGAC ATGGAGTTCG CCACCGGTAC CGAATCGAGC
ATGCAGGTGC GCCAACTGGC CCTGCCTTTG CCAGCCGGCG CGCTGCCGGC CGATGAGCCG
GGCCAGGCGC CTGACGATGC ACCGGTTGTC GACAGCCAGA TGGCGGTGGT GCCTGCCGGC
AAGGGCCCAC GGCCATGA
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| Protein sequence | MKPSKLCKPA PFMLLALCVA IAGCGSSAVR KDSQALMKEG QYEAGIARLE EALRDDPRDT
DLNIALAQGR QQAVEALLSQ ADSDRIRHDF AGARLGYGRV LTLEPNNRRA HEGIRQLELM
RTLDDRVALG QAALRQGDLF GAERYMREVL RLDPQNQKGI MLRSDIENVQ ARTAQPFPQL
RSKLERPVTL EFRDAELKVI FEVLSQVAGI NFIFDKDLRP DMKATIFVRE VRIEDAIALL
LEQNQLRQKI VNDNTLLVYP DSPQKTKDYQ ELVMRTFYLT SIDANTALNM VKTMLKTRDV
FVDERLNTLT MRDTPDAVRM AEKLLQSQDQ SNPEVVLEVE VMEVARSRIL DLGLQWPNTF
GVLSDEGNPV SVLDQLRGIN SGRISISPAP QAKINAQDKD INTLASPVIR VSNREQARIH
IGQRVPIISA TSVPSTQGPV ITESVTYLDV GLKLEVQPTV HLNNEVAIKV ALEVSNATPL
EPTRQGTIPV QVDTRNAQTS LRLHDGETQV LAGLVRNDKT SSGNKIPGLG DIPGLGRLFG
SNRDDMSKSE LVLAITPRIV RNLPYQSPSD MEFATGTESS MQVRQLALPL PAGALPADEP
GQAPDDAPVV DSQMAVVPAG KGPRP
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