| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2466 |
|---|
| Symbol | |
|---|
| ID | 6111419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2744407 |
|---|
| End bp | 2744970 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641622261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001749335 |
|---|
| Protein GI | 170721647 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3167] Tfp pilus assembly protein PilO |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.315347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.924557 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCC CTGACTCGAT AAACAGCCTG ATCCTCCAGG AGCAGTTGCG CCGTATCGGC
CCGGTCGGCC TGGCCGGCGC CGCAGTGGCC GTCCTGGCAG TCGCTGTAGC GCTGGCCGGG
GTGCTGCCGC AGTGGCAGGC CCTGCGCGAG CTGCGCGCCA GCGAGGCCGA TGCCAGCGCC
CAGGTCGAGC GGGTCAGGCG TGGCGAGCTG AAAGTCGCCG TCAAGCCTGA ACAGCAAGCG
CTGGACAGCC TGCGTCAGCA ACTGCCAGGG CAACCTGAAG CCAGCGAACT GATCGAGCGG
CTGTACCACC TGGCCAGCGC CGAACGTATC AGCCTGGCCC GTGGTGAGTA CGCCCTGGGT
GTCGACCCCA AGACCCAGCT GGCGCGTTAC CAGATCGTCC TGCCGGTACG CGGCAGCTAT
CCGCAGATCC GCGGCTTTGT GCGCGGCCTG CTGGGCCAGT TGCCGACCCT GGTGCTGGAA
GACCTTGAGC TGCAGCGCAA GCGCATTGGC GACAGTGAGC TCAATGGCCG CCTGCGCATG
ACCCTTTACC TGTCGAGGTC GTGA
|
|---|
| Protein sequence | MRAPDSINSL ILQEQLRRIG PVGLAGAAVA VLAVAVALAG VLPQWQALRE LRASEADASA
QVERVRRGEL KVAVKPEQQA LDSLRQQLPG QPEASELIER LYHLASAERI SLARGEYALG
VDPKTQLARY QIVLPVRGSY PQIRGFVRGL LGQLPTLVLE DLELQRKRIG DSELNGRLRM
TLYLSRS
|
|---|
| |