| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2457 |
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| Symbol | |
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| ID | 6111410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2734894 |
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| End bp | 2736876 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622252 |
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| Product | cytochrome d1 heme region |
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| Protein accession | YP_001749326 |
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| Protein GI | 170721638 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.274267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAACA AGAAAACCCG CCCCGCCGTG CTGGGGGTAT TGCTGGGCAC GGCGTTGATC
GGCCTGGGCG TGGCCTACGA GGAGCTCTGG TGTGACCCGC GCGAGCTGCT GCAGGAGCCC
GCAGACCCGC AGGCGCTGCA CCGGCTCAGC CGGGATGGTG TGACCGTGGA GTTCGAAGCG
CGGCCCCTGG CCGGTAGCGA GCTGCGCGAA GGCGCCTTCG CCAATATTCG CTTCAAGGTC
ACCGACCAGA ACAGCGGCCA ACCGCTGTCG GGGATGGCGC CAGGGGCGTG GATCGACCCG
GCGCAGTCGG CCCCACTGGA AAGCAGCCGT GACCAGAGCT GCAAGGCCCG GGTGGCGCTG
TTTCTCAAGA GCAGCATCGG TGCCAGGCCG CTGCTGGACC TGAACAGCTA CTTCCTTTTG
GTGCTGAACA AGGATGCCAG CCTGACCGTG ATCGACCCGA CAGTCTCGGT GGGCGGTGTT
ACCAGCACCC TGGCACGCAT CGATTTGCCG GGTCGGCCCA TGGACTGGGT GGCTACCGGC
GATGACAAGC AGGTATTCGT GTCGATACCC GAACGCGGCG AGGTCGCGGT GATCGACACC
GAAACCTTTA CCCGCGTGGC CACCCTGGCG GCCGGCGAGA TGCCGCTGCG CGTGGCCTTG
CAGCCGGACC AGCGCCGGTT GTGGGTCGGC AACAACAGTG ATGATCCGGC CAAGGGCGGG
GTGACGGTGA TCGATGTACA CAGCCGCACC ACGCTCAAGA GCTTCGCCAC CGGCTCCGGG
CACCACGAAA TCGCCTTCAG CGCCGATTCG CGCTACGCCT TCGTCAGCAA CCGCGACGGC
GGCACCTTGA GCATCATCGA CATCCCCGAA ATGCGCCTGG TGAAAACACT CGACGTCGGC
CCGCATCCGC TGGCAGTGGC CTACTCGCCG CTATCCCAGG CGGTGTACGT GAGCGATGGT
TCAGAGGGCA CGGTGCGGGT GTACGATGCC CGTAGCCATC AGTTGCGCCA TACCGTCCAG
GCCGAGCAAG GCCTGGGGCC GATGCGCTTT AGCAGCGATG GCCGTTACGG CATCGTCCTC
AACACCTTGG AAAACCAGGC GCTGGTGATC GATGCCAGTA CCGACAGGTT GATCCACCGC
ATCCCGGTGG CGGCCGAGCC GTACCAACTG ACGTTCACCA AAGGTTATGC CTACGTGCGC
GGCCTGGCGT CTTCGAAGGT CAGCATGATC AACCTGAGCA GCCTGGGCGA AGGGCGTCAA
CCGATCATCC AGGGTTTCGA TGCTGGTCCC GCCGCGCCGC GCCAGGCCGG GGACCTGCCG
TTGGCCCAGG GGTTATCGGT GTCACGGGAT GACAATTCGG TATTCGTGGT CAATCCGGTG
GACAACACCA CGTACTTCTA TACCGAAGGC ATGAATGCAC CGATGTCGGG TTACAACAAC
CGCGGCCACC AGGCCCGTGC CGCCATCGTC ATCGACCGCA GCCTGCGCGA ACTGGCCCCA
GGGGTGTATG GCTCGACGGT GAAGATGCCG GCGTCGGGCA AGTTCGACGT GGCGTTCCTG
CTCAACCAGC CGCAGATCAT CCACTGTTTC AGCACCGACG TGGCTGCCGC CCCGGATGCG
GTCAAGCGCA AGGGCGCGCA TGCCGAGTTC CTCGGCCTCG ACCAACCTTT ACCGCAACAC
AGCGCCTTCA CCGCCAAGGT GCGTATCGTC GGTGATGACG GACGCCCGCG CGTAGGCCTG
GACGACCTGA CCCTGCGTTA CTTCCTGGCG CCGTCGTCGA TGCCGCGCAA CTTGCGGCTG
GAAGAGGTGG GTGAGGGCGT GTACCAGGCC GCGCTGATGC TGCCTGAAGC GGGTGCCTGG
TACCTGCATG TGCAGTCACC GTCGCTGGGG CGCAAGTTCG CCGAAGAAAA CTACACCAGC
CTGCGCGTCC TGCCGGCCGC AGCGTCTGCC GCTTCACAGA CTGAAGTGAG GAATGTGCAA
TGA
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| Protein sequence | MHNKKTRPAV LGVLLGTALI GLGVAYEELW CDPRELLQEP ADPQALHRLS RDGVTVEFEA
RPLAGSELRE GAFANIRFKV TDQNSGQPLS GMAPGAWIDP AQSAPLESSR DQSCKARVAL
FLKSSIGARP LLDLNSYFLL VLNKDASLTV IDPTVSVGGV TSTLARIDLP GRPMDWVATG
DDKQVFVSIP ERGEVAVIDT ETFTRVATLA AGEMPLRVAL QPDQRRLWVG NNSDDPAKGG
VTVIDVHSRT TLKSFATGSG HHEIAFSADS RYAFVSNRDG GTLSIIDIPE MRLVKTLDVG
PHPLAVAYSP LSQAVYVSDG SEGTVRVYDA RSHQLRHTVQ AEQGLGPMRF SSDGRYGIVL
NTLENQALVI DASTDRLIHR IPVAAEPYQL TFTKGYAYVR GLASSKVSMI NLSSLGEGRQ
PIIQGFDAGP AAPRQAGDLP LAQGLSVSRD DNSVFVVNPV DNTTYFYTEG MNAPMSGYNN
RGHQARAAIV IDRSLRELAP GVYGSTVKMP ASGKFDVAFL LNQPQIIHCF STDVAAAPDA
VKRKGAHAEF LGLDQPLPQH SAFTAKVRIV GDDGRPRVGL DDLTLRYFLA PSSMPRNLRL
EEVGEGVYQA ALMLPEAGAW YLHVQSPSLG RKFAEENYTS LRVLPAAASA ASQTEVRNVQ
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