| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2448 |
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| Symbol | |
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| ID | 6111401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2722036 |
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| End bp | 2723277 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641622243 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001749317 |
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| Protein GI | 170721629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.773044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCACT CACTCAAACC CTTGCGCTTC CCCCTCGCTG CCCTGGCAGT GGTGGTGCTC
AGCGCTTGTG GCCGCACCCC AGATGCCGTG CAGGCTCCCG CCGCGCCCAA GGTCACCGTC
GCCAAAGTGA TCGAGCAGCC GATCAACGAA TGGGACGAAT TCACTGGCCG CCTCGAAGCC
CCGGAAACCG TCGAAGTGCG CCCGCGCGTA TCCGGCCAGA TCGACCTGGT GGGCTTCACC
GAAGGCGCCC AGGTCAAGAA AGGCGACCTG CTGTTCCAGA TCGATCCACG CCCGTTCCAG
GCCGAAGTGC GCCGCCTCGA AGCACAATTG CAACAGGCCA AGGCCACCGC CATCCGCAGC
GCCAACGAAG CCCGCCGTGG CGAGCGTCTG CGTGACAGCA ACGCCATCTC CGCCGAGCTT
GCCGAGTCGC GAAGCAGCGC CGCCGCCGAG GCCCGCGCCG GTGTCGATGC GATCCAGGCC
CAGCTTGACC TGGCCCGCCT GAACCTCAGC TTTACCCGTG TCACCGCGCC GATCAGCGGC
CGTGTCAGCC GCGCCCAGTA CACCGCCGGC AACATCGTCA CTGCCGATGT CACGCCACTG
ACCAGCGTGG TCTCCACCGA CAAGGTCTAT GCCTACTTCG ACGCCGACGA GCGCGTGTAC
CTCAAGTACA CACAGCTGGC CCGTGAAGGG CAGCGCGGCC AAGCCACTCC GGTTTACCTG
GGCCTGACCA ACGAAACCGG CAACCCGCAC CTTGGCCAGA TGAACTTCGT CGACAACCAG
GTCAACCCGC GCACCGGCAC CATCCGTGGC CGTGCCGTGT TCGACAACCG CGACGGCCAG
TTCACCCCTG GCCTGTATGC CCGTCTGAAG CTGGTGGGCA GCGCCCAGTA CGACGCCGTG
CTGATCAACG ACGAAGCCGT GGGCACCGAC CTTGGCAAGA AGTTCGTGCT GGTGATGGAC
AAGGACAACA AGGCGACCTA CCGCGCCGTG GAACTGGGGC CCAAGCTCGA AGGCCTGCGT
ATCGTGCGCA GCGGCCTGGG CAAGGATGAT CGCATCGTGG TCAAGGGCCT GCAGCGGGTA
CGCCCTGGCT CGCCAGTCAC CCCGCAAGAA ACACCCATGG CCAGCGAACA GACCCTCGCC
GCCCTCGCCC AGCAGCGCCA GGCTCTAGAA GCCAGCAACC CGCCGCCGAA GGTTGCCGGC
ACCAATGCAA AAGTCGCCAG CGCCCAAGCG CCGCGCGGTT AA
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| Protein sequence | MDHSLKPLRF PLAALAVVVL SACGRTPDAV QAPAAPKVTV AKVIEQPINE WDEFTGRLEA
PETVEVRPRV SGQIDLVGFT EGAQVKKGDL LFQIDPRPFQ AEVRRLEAQL QQAKATAIRS
ANEARRGERL RDSNAISAEL AESRSSAAAE ARAGVDAIQA QLDLARLNLS FTRVTAPISG
RVSRAQYTAG NIVTADVTPL TSVVSTDKVY AYFDADERVY LKYTQLAREG QRGQATPVYL
GLTNETGNPH LGQMNFVDNQ VNPRTGTIRG RAVFDNRDGQ FTPGLYARLK LVGSAQYDAV
LINDEAVGTD LGKKFVLVMD KDNKATYRAV ELGPKLEGLR IVRSGLGKDD RIVVKGLQRV
RPGSPVTPQE TPMASEQTLA ALAQQRQALE ASNPPPKVAG TNAKVASAQA PRG
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