| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2446 |
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| Symbol | |
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| ID | 6111399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2717432 |
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| End bp | 2718847 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641622241 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001749315 |
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| Protein GI | 170721627 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.177234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TCAAACCCCT GACCCCGAGC CTGCTGGCAC TGGCCCTGGC GGCCTGCGCG
GTAGGCCCGG ACTACAAAGC GCCGGACACT GAGCCTGCGC GTTTGGCCAG CGACGTGCAG
GCCAAGGCCT TCGACCGTAG CCGCTTCGAA AGCGTGTGGT GGAAGCAGTT CGATGACCCG
GTACTGAACC AGTTGGTGCA GGCTTCGCTG GACGGCAACC GCGACCTGCG CGTGGCCTTT
GCACGGCTCA AGTCGGCGCG GGCGATCCGC GATGATGCCG CCAATGACCA GTTGCCGGTG
GTCACCAGCC GCGCCAGCAG TGAGATCGGC AAGGGCCAGG TACCCGGCCA GACCGATCAA
CGGGTCAACA GCGAGCGTTA CGACCTGGGC CTGGACATGG CCTGGGAGCT CGACCTGTTC
GGCCGTATCC AGCGCCAGAT CGAAGCCAGC GACGCTCAGG CAGCTGCCGC CCAGGCCGAC
CTGCAGCAGT TGCAGGTCAG CCTGATCGCT GAACTGGTCG ATGCCTATGG CCAGCTGCGG
GGTGCACAAC TGCGCGAGAA GATCGCCGTG GCCAACCTCA AGACCCAGCA GGAATCGCGC
AGCATCACGG TGACCCTGCG CGACGCCGGG GTCGGCAACG AGCTCGATGT GGTGCGCGCT
GACGCCCGCC TGGCCGGGGT CGAAGCCACA GTGCCGCAAC TGCAGGCCGA GCAGGCACGG
GCTCGCCACC GCATTGCCAC CCTGCTCGGC CAGCGCCCGG ATGCCCTGAG CGTGGACCTC
TCGCCCAAGG CCTTGCCGGC TATCGCCAAG GCCCTGCCGG TAGGCGACCC GGGTGAACTG
CTGCGCCGCC GCCCAGATAT CCGCAGTGCC GAGCGCCAAC TCGCCGCAGC CACCGCCAAT
GTGGGCGTGG CGACTGCCGA CCTGTTCCCG CGGGTAAGCC TGAGCGGCTT TTTAGGCTTT
ACCGCGGCGC GCGGTTCGCA GATCGGCTCG TCGGCAGCCA ACGCCTGGGG GCTGGGGCCA
AGCATCACTT GGGCTGCGTT CGATCTGGGT AGCGTGCGCG CCCGCCTGCG CGGTGCCAAA
GCCGATGCAG AGGGTGCCTT GGCCAATTAT GAACAGCAGG TATTACTGGC CCTGGAAGAG
TCGGCCAATG CCTTCAGCGA CTATGACAAG ACCCAGCAGC GGCTGCTGTC GCTGATGCGT
CAGAGCGATG CCAGCCGCAA GGCGGCAGAT CTGGCCTCGG TGCGCTACCG CGAAGGTACG
GTGGATTATC TGGTGCTGCT CGATGCCGAG CGTGAGCGGC TGAGCGCCGA AGATGCACAG
GCGCAGGGTG AGGTTGACCT GTATCGCGGC ATTGTCTCGA TCTACAAGGC GCTGGGCGGC
GGCTGGCAGC CGGACTCGGT GGCCAGCGTG CGCTGA
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| Protein sequence | MKLLKPLTPS LLALALAACA VGPDYKAPDT EPARLASDVQ AKAFDRSRFE SVWWKQFDDP
VLNQLVQASL DGNRDLRVAF ARLKSARAIR DDAANDQLPV VTSRASSEIG KGQVPGQTDQ
RVNSERYDLG LDMAWELDLF GRIQRQIEAS DAQAAAAQAD LQQLQVSLIA ELVDAYGQLR
GAQLREKIAV ANLKTQQESR SITVTLRDAG VGNELDVVRA DARLAGVEAT VPQLQAEQAR
ARHRIATLLG QRPDALSVDL SPKALPAIAK ALPVGDPGEL LRRRPDIRSA ERQLAAATAN
VGVATADLFP RVSLSGFLGF TAARGSQIGS SAANAWGLGP SITWAAFDLG SVRARLRGAK
ADAEGALANY EQQVLLALEE SANAFSDYDK TQQRLLSLMR QSDASRKAAD LASVRYREGT
VDYLVLLDAE RERLSAEDAQ AQGEVDLYRG IVSIYKALGG GWQPDSVASV R
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