| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2417 |
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| Symbol | ureC |
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| ID | 6111370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2685416 |
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| End bp | 2687119 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622212 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001749286 |
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| Protein GI | 170721598 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.254104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TCTCACGTCG GGCCTATGCC GACATGTTCG GCCCTACCGT CGGCGACCGG
GTGCGCCTGG CCGACACTGC CCTGTGGGTG GAGGTCGAGA AGGACTTCAC GGTTTACGGC
GAAGAGGTCA AGTTCGGCGG TGGCAAGGTC ATCCGCGACG GCATGGGGCA GGGCCAGATG
CTCGCGGCCC AGGCCATGGA CCTGGTGCTG ACCAACGCCC TGATCATCGA CCACTGGGGC
ATCGTGAAAG CCGATATCGG GGTCAAGCAC GGGCGTATCG CTGCCATCGG CAAGGCCGGC
AACCCTGACG TGCAGCCGGG CGTGACCGTG CCGGTCGGCC CGGGCACTGA AGTGATCGCG
GCCGAAGGCA AGATCGTCAC GGCCGGGGGC ATCGATTCGC ACATTCACTT CATCTGCCCG
CAGCAGGTGG AAGAGGCGCT GACCAGTGGC GTTACCACGT TCATCGGCGG CGGCACCGGG
CCTGCCACCG GTACCAATGC CACGACCTGC ACCCCAGGGC CGTGGTACCT GGCGCGCATG
CTCCAGGCGG CCGACAGCCT GCCGATCAAC ATCGGCTTGC TGGGCAAGGG CAATGCCTCG
CGCCCTGAAG CGCTGCGCGA GCAGATCGCT GCAGGCGCGG TGGGCCTGAA GCTCCACGAG
GATTGGGGGT CTACCCCGGC AGCCATCGAC TGCTGCCTGA GCGTCGCCGA AGAAATGGAC
ATCCAGGTGG CGATTCACAC CGACACCCTC AACGAATCCG GTTGCATTGA AGACACCCTG
GCCGCCATCG GTGATCGCAC CATCCATACC TTCCACACCG AAGGGGCCGG CGGCGGCCAT
GCACCCGATA TCATCCGCGC GGCGGGGCAG GCCAACGTGC TGCCGTCCTC GACCAACCCG
ACCCTGCCCT ATACGGTCAA TACCGTCGAT GAACACCTCG ACATGCTGAT GGTCTGCCAC
CACCTGGACC CGAGCATCGC CGAGGACGTG GCGTTCGCCG AATCGCGCAT CCGCCGTGAA
ACCATCGCCG CCGAGGACAT CCTGCACGAC ATGGGCGCCT TCGCCATGAC CTCGTCCGAC
TCTCAGGCCA TGGGCCGCGT TGGCGAGGTG GTGCTGCGTA CCTGGCAAGT CGCGCACCAG
ATGAAAGTGC GCCGCGGCCC GCTGGCACCG GACAGCAGCT ACAGCGACAA CTTCCGGGTC
AAGCGCTACA TCGCCAAATA CACCCTCAAC CCTGCGCTCA CCCATGGCAT CGCCCATGAG
GTGGGTTCGG TGGAGGTGGG CAAGCTGGCT GACCTGGTGC TGTGGTCGCC GGCCTTCTTC
GCAGTCAAGC CGGCGCTGGT CATCAAGGGC GGGATGATCG TCACAGCGCC CATGGGCGAC
ATCAATGGCT CTATCCCGAC GCCACAACCG GTGCATTACC GTCCCATGTT CGGCGCGCTC
GGTGCGGCCC GCCATGCCAC GCGCATGACC TTCCTGCCCC AGGCCGCCAT GGACCGTGGC
CTGGCCCAGG AACTGGGTTT GCAGAGCCTG ATCGGTGTGG CTCACGGCTG CCGCCGGGTG
CGCAAGGCCG ATATGGTCCA CAACACATTG CAACCGGTGA TCGAAGTCGA TTCGCAGACC
TACCAGGTGC GCGCCGACGG CGAACTGCTG GTTTGCGAGC CGGCCAGCGA ACTGCCGCTG
GCTCAGCGTT ATTTCCTGTT CTAA
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| Protein sequence | MSRISRRAYA DMFGPTVGDR VRLADTALWV EVEKDFTVYG EEVKFGGGKV IRDGMGQGQM
LAAQAMDLVL TNALIIDHWG IVKADIGVKH GRIAAIGKAG NPDVQPGVTV PVGPGTEVIA
AEGKIVTAGG IDSHIHFICP QQVEEALTSG VTTFIGGGTG PATGTNATTC TPGPWYLARM
LQAADSLPIN IGLLGKGNAS RPEALREQIA AGAVGLKLHE DWGSTPAAID CCLSVAEEMD
IQVAIHTDTL NESGCIEDTL AAIGDRTIHT FHTEGAGGGH APDIIRAAGQ ANVLPSSTNP
TLPYTVNTVD EHLDMLMVCH HLDPSIAEDV AFAESRIRRE TIAAEDILHD MGAFAMTSSD
SQAMGRVGEV VLRTWQVAHQ MKVRRGPLAP DSSYSDNFRV KRYIAKYTLN PALTHGIAHE
VGSVEVGKLA DLVLWSPAFF AVKPALVIKG GMIVTAPMGD INGSIPTPQP VHYRPMFGAL
GAARHATRMT FLPQAAMDRG LAQELGLQSL IGVAHGCRRV RKADMVHNTL QPVIEVDSQT
YQVRADGELL VCEPASELPL AQRYFLF
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