Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2392 |
Symbol | |
ID | 6111345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2659115 |
End bp | 2659867 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622187 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001749261 |
Protein GI | 170721573 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCC TGATACCCAG CGAAGACGAA CTGCATGCCT ATGTTGACGA TCGACTCGAG CCGACGCGAC GTGCCGAGGT GCAGGCCTGG CTGACGGCCA ACCCTCAGCA AGCTGCGCGT ATCGAGGCCT GGCGCAACGA TGCTCGACGC TTGCGCACGG CCCTGGCCGG GTTTGGCGAT CAACCCAGGG CGGCCCAGTT GGATCTGGGC CAGTTACAGC GTCGTGTGCG TCAACGGCGC CAGCGTCGGC TGGCTTCGGC TGCTGTGCTG CTGCTGGCCC TGGGCGTGGG CGGGGTTGGC GGTTGGCAGG CGCGGCAGGT CACGCTGGCA GGGAGCGAGT TGCCCATGGC CGATGCGCTC CAGGCGCATC GCTTGTTCGC CGGCAGTGAG GCGCTGGATA TCCAGGCAAG TGACCCGACG CAGCTGCGTC ACTGGCTGGG CAGGCATTTC AGCAGGGTGG GGCAATTGCC TGATTTGACC GGTTACGGGT TCCAGCCTGT GGGCGCACGA TTGTTGAGCA ATGAGCAAGG GCCGGCGGCG TTGCTGGTGT TCCAGGACCG TCAAGGGCAG CGCATCAGCC TGTTCCTGCG CTCACCTGGC GAGCGTTTCG AGCGTATGCC GCAAGGGCAG CGTGTCGATG GCCAGCTGGA GGCGAGGTAC TGGTCGCATG GAGCCTACAA CTTTGCCCTG GTCAGTGCGG CGGATGATGT GCGCGGGGCG GGTGTGGGGG AGGCCTTGCG TTTAGGCCTT TAG
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Protein sequence | MTRLIPSEDE LHAYVDDRLE PTRRAEVQAW LTANPQQAAR IEAWRNDARR LRTALAGFGD QPRAAQLDLG QLQRRVRQRR QRRLASAAVL LLALGVGGVG GWQARQVTLA GSELPMADAL QAHRLFAGSE ALDIQASDPT QLRHWLGRHF SRVGQLPDLT GYGFQPVGAR LLSNEQGPAA LLVFQDRQGQ RISLFLRSPG ERFERMPQGQ RVDGQLEARY WSHGAYNFAL VSAADDVRGA GVGEALRLGL
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