Gene PputW619_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2391 
Symbol 
ID6111344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2658597 
End bp2659118 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID641622186 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001749260 
Protein GI170721572 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC TGGACGAACA GCAGTGGCGC GAGTTGCTGC AGCGCCTGCG CCGCTTTGCC 
TTGTGGCTGA GCCGCGACCC GGGCAGCGCC GACGACCTGG TGCAGGGCAC TGTAGAGCGT
GCCCTCAGCC GCAGCAGCCA GCAACGTGAT GGTGATGCGC TGCGTGCCTG GTTGTTCACC
ATTCTTTACC GGCTGTTTCT CGACGGTAAA CGCCGTGAGC GCCTGCACAA CCGGTGGCTA
TCGTGGTTCG GCCGCGCCGA GCAGGAGAGC GAAGTACTCG GCGGCAACAT CGAAAACATC
GTTCTGGCCC AGGCCGACCT GCAAGCCTTT GCCCGGCTAT CGACCGAACA GCGTGCCTTG
TTGCTGTTGG TGAGTGTCGA AGGGCTGAGC TACAAGGAGG CGGCCCAAGC ACTGGGCATT
CCGATTGGCA CGGTGATGTC GCGCCTGTCA CGTGCCCGTG CCGCCTTGCG TGAACTGACT
GAGGGCAACC CCCAGCCCCC AGCCTTGCGG AGACTGAAAT GA
 
Protein sequence
MHDLDEQQWR ELLQRLRRFA LWLSRDPGSA DDLVQGTVER ALSRSSQQRD GDALRAWLFT 
ILYRLFLDGK RRERLHNRWL SWFGRAEQES EVLGGNIENI VLAQADLQAF ARLSTEQRAL
LLLVSVEGLS YKEAAQALGI PIGTVMSRLS RARAALRELT EGNPQPPALR RLK