| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2388 |
|---|
| Symbol | |
|---|
| ID | 6111341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2655601 |
|---|
| End bp | 2656803 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641622183 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001749257 |
|---|
| Protein GI | 170721569 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCG CCAAGGACCC TGCCACACTG ACCACCGCCA GTACACTGGA CACGCGCCCG
TTGCTGCTGG CCAACATGGC CTGCACCATG TCGATGATGG CGTTCGTCGC CTTGATCGGG
CCAATCGCCC GCCTGCTCGG CATGGCCACC TGGCAAGCCG GCGCTGCGGT GACTGTGTCA
GGTGTGGTCT GGGTGCTGCT GGCCCGCCCC TGGGGGCGCG CAGCCGACCG CCTGGGCCGC
CGGCGCATCC TGCTGCTGGG CAGTGCCGGC TTCACGGTGG CGTATTGGCT GCTGTGCCTG
TTCGTCGAAG GCGCATTGCG CTGGATACCG GGGGCTAGCT TGGCGTTCGT CGGCCTGATG
CTCGCGCGCG GCTGCATCGG CGCCTTCTAC GCGGCCATCC CGGTGGGCTG CAATGCGCTG
ATCGCCGACC ATATAGGGCC ACAACAGCGC GCCCGGGCCA TGGCATCGCT GGGTGCAGCG
AATGCTGTGG GCCTGGTACT CGGGCCAGCG TTTGCGGCAT TGCTGGCACG GCACAGCCTG
AGCCTACCCT TCCATGTGAT GTCGCTGCTG CCTGCCAGTG CGTTTCTGGT CCTGCTGTTC
AAACTCAAGC CACAGCCACT GGCCCATCGC CATGCGCCCA GCCCGGTGCA CTTGAGCGAC
CCGCGCCTGC GCCGGCCTCT GCTGGTGGCC TTCAGCGCGA TGCTCAGTGT GACGGTGTCG
CAGATCATCG TCGGCTTCTT CGCCCTCGAC CGCCTGCAGT TGGGGCCGGC AGAGGCCGCC
CAGGCTGCCG GCATCGCCCT GACCACCGTC GGGGTGGCAC TCATCCTGTC ACAAATCATC
CTGCGCCAGC TCGAGTGGCC ACCGCTGAAA ATGATCCGCG TTGGCGCCAG CGTTTCGGGA
CTGGGCTTTG CCGCCGGTTC GCTGGCTACC AGCGCGCCGT GGCTGTGGGG GTGCTATTTT
GTCGCCGCCG CCGGCATGGG CTTTGTCTTC CCAGCGTTCT CGGCACTCGC CGCCAATGCC
ATGCACGCTT CAGAACAGGG CGCCACTGCC GGCTCCATCG GCGCCGCTCA AGGTATGGGC
GCGGTGATCG GCCCGCTGGC CGGGACGCTG ATCTACGCCC TCGACCCACG CCTGCCATTT
CTGGTAGTGG CTGTGCTGTT GTTGCTGGTC GGGCTATGGC CGATGCCGCG CTCGCGGGCC
TGA
|
|---|
| Protein sequence | MNVAKDPATL TTASTLDTRP LLLANMACTM SMMAFVALIG PIARLLGMAT WQAGAAVTVS
GVVWVLLARP WGRAADRLGR RRILLLGSAG FTVAYWLLCL FVEGALRWIP GASLAFVGLM
LARGCIGAFY AAIPVGCNAL IADHIGPQQR ARAMASLGAA NAVGLVLGPA FAALLARHSL
SLPFHVMSLL PASAFLVLLF KLKPQPLAHR HAPSPVHLSD PRLRRPLLVA FSAMLSVTVS
QIIVGFFALD RLQLGPAEAA QAAGIALTTV GVALILSQII LRQLEWPPLK MIRVGASVSG
LGFAAGSLAT SAPWLWGCYF VAAAGMGFVF PAFSALAANA MHASEQGATA GSIGAAQGMG
AVIGPLAGTL IYALDPRLPF LVVAVLLLLV GLWPMPRSRA
|
|---|
| |