Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2387 |
Symbol | |
ID | 6111340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2654979 |
End bp | 2655524 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641622182 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001749256 |
Protein GI | 170721568 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACGG GGACACGACT CAAACTGGTG CGTGAACGCA ACAACCTTTC CCAACGCGAA CTGGCCCGCC GCAGCGGGCT GACCAACTCG ACCATTTCGC AAATCGAGCA AAACCGCGTC AGCCCATCGG TAAGCTCCCT GAAAAAACTG CTCGAAGGCA TCCCGATGAC CCTGGCAGAG TTCTTCAGCT TCGACGAGCC GGTACGGGAA GAGCGCTTCG TGTTCCGCGC CTCCGAGCAG CCCGACCTGG GCCGCAATGG CCTGCGCATG TTGCTGGTCG GTGCCAGCGT AGAGGCACGG CAGATGCGCA TGCTGCGTGA ACTGTATGCA CCGGGTGCCG ATTCGGGTGA ACCGATCGTG CACGCCGAGG GCGAGGAATG CGGGCTGGTC ACACGGGGCA CCGTGGAACT GTGGGTCGAT GGCCAGGTCA GCGTTCTCAA CTCCGGCGAC GGTTATTACA TCCCCACCAC CCTGCCGCAC AGCTTCAAGA ACATTGGTCA GGACGAGGCG GAGATCATCA GCGCCAACAC GCCGGCCAAC TTCTGA
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Protein sequence | MDTGTRLKLV RERNNLSQRE LARRSGLTNS TISQIEQNRV SPSVSSLKKL LEGIPMTLAE FFSFDEPVRE ERFVFRASEQ PDLGRNGLRM LLVGASVEAR QMRMLRELYA PGADSGEPIV HAEGEECGLV TRGTVELWVD GQVSVLNSGD GYYIPTTLPH SFKNIGQDEA EIISANTPAN F
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