Gene PputW619_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2387 
Symbol 
ID6111340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2654979 
End bp2655524 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content62% 
IMG OID641622182 
ProductXRE family transcriptional regulator 
Protein accessionYP_001749256 
Protein GI170721568 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGG GGACACGACT CAAACTGGTG CGTGAACGCA ACAACCTTTC CCAACGCGAA 
CTGGCCCGCC GCAGCGGGCT GACCAACTCG ACCATTTCGC AAATCGAGCA AAACCGCGTC
AGCCCATCGG TAAGCTCCCT GAAAAAACTG CTCGAAGGCA TCCCGATGAC CCTGGCAGAG
TTCTTCAGCT TCGACGAGCC GGTACGGGAA GAGCGCTTCG TGTTCCGCGC CTCCGAGCAG
CCCGACCTGG GCCGCAATGG CCTGCGCATG TTGCTGGTCG GTGCCAGCGT AGAGGCACGG
CAGATGCGCA TGCTGCGTGA ACTGTATGCA CCGGGTGCCG ATTCGGGTGA ACCGATCGTG
CACGCCGAGG GCGAGGAATG CGGGCTGGTC ACACGGGGCA CCGTGGAACT GTGGGTCGAT
GGCCAGGTCA GCGTTCTCAA CTCCGGCGAC GGTTATTACA TCCCCACCAC CCTGCCGCAC
AGCTTCAAGA ACATTGGTCA GGACGAGGCG GAGATCATCA GCGCCAACAC GCCGGCCAAC
TTCTGA
 
Protein sequence
MDTGTRLKLV RERNNLSQRE LARRSGLTNS TISQIEQNRV SPSVSSLKKL LEGIPMTLAE 
FFSFDEPVRE ERFVFRASEQ PDLGRNGLRM LLVGASVEAR QMRMLRELYA PGADSGEPIV
HAEGEECGLV TRGTVELWVD GQVSVLNSGD GYYIPTTLPH SFKNIGQDEA EIISANTPAN
F