| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2361 |
|---|
| Symbol | |
|---|
| ID | 6111314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2633823 |
|---|
| End bp | 2634362 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641622156 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001749230 |
|---|
| Protein GI | 170721542 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.55927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCT ACAGTGCTGG CGTTGAATAC GGCATCCATT GCCTGCTGTA CCTGGTTGAC
GAGCGCGGTG ATACCCGCGA GTCCAGCGTT CGCGACCTGG CGCAGTTACA GGGGGTGCCG
CAGGAATACC TGGCCAAGGT ATTCACCAAA CTGGCCCGGG CCAAACTGGT GGCAGCGACC
GAAGGCGTGC GAGGGGGCTT TCGACTGGCA CGGCCGTCGG ACGAGATCAC CGTGCTGGAC
ATCGTCAATG CTATTGACGG GCCGAAGAAG ATCTTCGACT GCCGCGAGAT CCGCGAGCGT
TGCACGCTGT TCGAAGGCTC ACCGCCGGGT TGGGCCACCG AGGGCACCTG TGCGATTCAT
GCAGTGATGC TGGGGGCGCA GAAGCGGATG GAAGAGGCCC TGGCGCAGCA GACTATCCTC
GACCTGGCAC GGCGCTTTGG GCGCAAGGCA CCGGCGGAGT TCGGCCAGCA GGTCAGTGAC
TGGATAGGGG AGCGGCGCGA GGGCAAAGGT GGGGGAGATA TTCCGGTGAG TCAGGTCTAG
|
|---|
| Protein sequence | MSLYSAGVEY GIHCLLYLVD ERGDTRESSV RDLAQLQGVP QEYLAKVFTK LARAKLVAAT
EGVRGGFRLA RPSDEITVLD IVNAIDGPKK IFDCREIRER CTLFEGSPPG WATEGTCAIH
AVMLGAQKRM EEALAQQTIL DLARRFGRKA PAEFGQQVSD WIGERREGKG GGDIPVSQV
|
|---|
| |