| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2306 |
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| Symbol | |
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| ID | 6111259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2580093 |
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| End bp | 2581592 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641622101 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001749175 |
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| Protein GI | 170721487 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.354077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC TCTACGATGA GCGAGTCGAC GGTGCCCTGC CGCGGGTCGA CAAGGCTGCC
CTGCTTTTTG AGCTACAAGA GTCCCTTCCA GATCTGGAAA TCCTCCACAG CCAAGAAGAT
CTCCTTCCCT ACGAGTGTGA TGGTCTTTCC GCCTACCGTG TGGTTCCGCT GTTGGTGGTA
CTGCCTAAGC GGATCGAGCA CGTCCAAGCC CTTTTAAAGA TTTGTCATGC CCGTCAGGTC
CCGGTGGTCG CACGCGGCGC TGGCACAGGT CTATCCGGAG GCGCCCTGCC ACTGGAGCAA
GGCATTCTGT TGGTAATGGC CCGCTTCAAC CGAATCATTG AGGTCAATCC CGAAGGTCGT
TACGCACGGG TTCAGCCCGG TGTTCGTAAC CTGGCGATTT CTCAGGCGGC TGCGCCTCAT
GGGTTGTACT ACGCACCTGA TCCTTCCTCA CAGATCGCTT GCTCAATCGG CGGCAACGTC
GCCGAGAACG CAGGTGGCGT GCATTGTCTG AAGTACGGTT TAACCGTACA CAACCTGCTC
AAGGTTGAGA TTCTCACCAT CGAAGGCGAG TACATGACCT TGGGCAGCGA TGCGCTAGAC
GCCCCAGGGT TTGACCTGTT GGCGCTGTTT ACTGGTTCTG AAGGCATGTT GGGCATTGTC
ACTGAGGTGA CTGTCAAACT GTTGCCCAAG CCCCAGGTCG CACGCGTTTT GCTGGCTAGC
TTCGACTCGG TGGAAAAAGC CGGGCGCGCA GTTGGCGATA TCATCGCCGC CGGCATCATC
CCCGGGGGGC TGGAGATGAT GGACAACCTG TCTATCCGCG CCACGGAGGA CTTCATTCAC
GCCGGTTACC CCGTGGACGC TGCTGCCATC CTGTTGTGCG AGCTTGACGG CGTAGAGTCC
GACGTGCAGG AGGACTGCGA ATGCGTCGAG GCAGTGCTTC GGGCTGCGGG CGCGACCGAC
GTGCGTCTGG CCTGCGATGA AGCCGAGCGC GCGCGCTTCT GGGCCGGACG CAAGAACGCC
TTCCCGGCGG TGGGGCGCAT CTCTCCAGAC TATTACTGCA TGGACGGCAC CATTCCACGC
CGTGAGTTGC CGGGCGTGCT CAATGGCATC ACGGAGCTTT CGGAACAATA CGGTTTGCGT
GTCGCCAACG TATTCCATGC CGGCGACGGC AATATGCATC CGCTGATTCT CTTCGATGCC
AACCAGCCTG GTGAACTGGA ACGTGCCGAG GCGTTGGGCG GGAAGATCCT CGAGCTGTGC
GTGGCAGTCG GTGGCAGCAT CACCGGTGAG CACGGTGTGG GCCGCGAGAA AATCAACCAG
ATGTGCGCGC AATTCAACAG CGATGAGCTG ACCCTGTTCC ACGCCGTCAA GCACGCCTTC
GACCCGCAGG GCCTGCTCAA CCCCGGCAAG AATATCCCTA CCCTGCACCG CTGCGCCGAA
TTTGGCTCGA TGCACGTGCA CCACGGCAAG TTGCCCTTCC CTGAACTGGA GCGCTTCTGA
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| Protein sequence | MNILYDERVD GALPRVDKAA LLFELQESLP DLEILHSQED LLPYECDGLS AYRVVPLLVV
LPKRIEHVQA LLKICHARQV PVVARGAGTG LSGGALPLEQ GILLVMARFN RIIEVNPEGR
YARVQPGVRN LAISQAAAPH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
KVEILTIEGE YMTLGSDALD APGFDLLALF TGSEGMLGIV TEVTVKLLPK PQVARVLLAS
FDSVEKAGRA VGDIIAAGII PGGLEMMDNL SIRATEDFIH AGYPVDAAAI LLCELDGVES
DVQEDCECVE AVLRAAGATD VRLACDEAER ARFWAGRKNA FPAVGRISPD YYCMDGTIPR
RELPGVLNGI TELSEQYGLR VANVFHAGDG NMHPLILFDA NQPGELERAE ALGGKILELC
VAVGGSITGE HGVGREKINQ MCAQFNSDEL TLFHAVKHAF DPQGLLNPGK NIPTLHRCAE
FGSMHVHHGK LPFPELERF
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