| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2288 |
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| Symbol | |
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| ID | 6111241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2558830 |
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| End bp | 2560623 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622083 |
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| Product | PucR family transcriptional regulator |
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| Protein accession | YP_001749157 |
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| Protein GI | 170721469 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0468789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC AACAAGAAAA AATCACGGCG TTGCGGCGGG TGGCGAGCCA GATCAGTTCC
GACGAGGACC TGGAATCGTT GCTCGGTGAG TTGACCCGCT CAGCCTGCCA GCAAGGCGGC
TGGGATCTAG GGTCTGTGAT GTGCATTGAT CTCGCTCACG GTTACGGTGT GGTCATGGCA
CGGTATGAGA GCAGCCGTTT GCCGCAGAAA ATGCAGGACC GCTGGGAACT GGCGACCAGT
CCCTCGCTAA TCGCGTTGCA GAGTGGGGAG CCGGTCTACA TCCGCGATGC CCAGCACACG
ACACGCTTTC CGGGCTATCG GCGTGACGCC CTGGCACGCA ACTACCGAAC CGTACTGGCC
CTGCCGATGC CCAGCAGCGA CGCTGAAGGA CGTCCGATGG TGCTCACTGT CATTTCTCGC
TCGGTCAGGG AGGTGGCCGA GGAGGACCTG ACCTTCATGG CCGCGGTGGT TGATCTGGGG
GCGATCGCGG TGGACCGTGC CCATCGACGC CGTGCGCAAC TGGAAGCCAA TGAGCAGTTA
CAACGCATCC TCGGTTCGCA GCGTTCGCTG TTACGCAACG TGCTGGCGGG CGACTCGTTG
CAAGCCTTGG CCGCCACCCT GGGAGAGTTG CTCGGTGGTG CGGTACTGGT GGCGGATTTC
TCCGCCGGCC ACGTGGTCGG CTCGGCTTCG GCCTTGCCGG CGCTGTACGA CGACACGCAA
TGGACACGCT GGCTGGCTGG CAGCGGCGGG CGCGAACTGC TGGGCTACAT TCACGACACC
TTGCAGCATC AGCGTGACGG TCAGGTGATG CTGCCGCTTG AGGGAGAGCA TCGGCTCGCG
GCGCACATCG AAGCGCTGAC GGTGGATGAT GAACAGGTCG GTGCGCTGCT GGTCGTGGGT
GATGCGCCGC CCGACACCCT GCGCAAGCTG CTCCTGGAGA ACGCCTGCTT CGCCTTGAGC
GTGCAATTGA TGCGCAGCGT GATCCGCTAC CGCTTTGAGA CCCGCACCCT GACCGAGTTG
TTTTCCGAGA TCGTCGAGCG CCGCTTCCGC GATTCGGAGG ATGTCCTCGC GCGCGCCCGG
CGCCTCGGCT TGCCGTTGGC CGCGCCGCTG CGCATGTTAG TCGTGGATTT TGCAGGTCAT
GGAAGCCATC GAAACAATCT GATGCTCGAA TGCAGTCGGC AGGTTTCCGG CCTGGCCAAG
CAGTTGCAAG TGCCCATGCA CATGGTCACC CTAGGTAGCG GCCTGGTTTG TCTACTGCCG
GTAGACGCCG AGCAGGTGGC GGTGCAAGCG CGGTTTGGCC GGCGTATCGC CGATGCCCTC
GGGCGTGTGC TAGGCCATGA GCCGATCGTG GTGCTGGGAG AAACGTTCGA GGGGCTCGAG
CCTTTGGCCA TCGAGTGGGA GCGCTGTTGG CGGATGATCC GCGTGGCCCG TGACTACGGG
CGCAGCGGCA TGCTCGAAAT GCCGGACCTG GGTGCGCTAC CGCTGCTCAT CGGCGCCGCC
GACGCCACCG ATGTGCGGCA CTTCATTAGC GGCACTCTGG GCAAGCTGAT CGAGTATGAC
AAGCGCAACT CTGCACCTTA CCTGGAGACC GTGACGGCTT ACCTGCGCTC AGGTTGTCGC
AGCCAGTTGG CCGCCGATGC GATGGGCTTG CACGTGACCA CGCTGCGTTA CCGGCTGGCA
CGGATTCAAG AGCTGTTCGG TCTGGACTTC GATACTCCTG AGCGGCGTTT CGCCCTTGAA
CTAGCGCTGC AGTTACACCA ACTGACTACC GGCGCAGAAC TCGGCAAAAG ATGA
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| Protein sequence | MPEQQEKITA LRRVASQISS DEDLESLLGE LTRSACQQGG WDLGSVMCID LAHGYGVVMA
RYESSRLPQK MQDRWELATS PSLIALQSGE PVYIRDAQHT TRFPGYRRDA LARNYRTVLA
LPMPSSDAEG RPMVLTVISR SVREVAEEDL TFMAAVVDLG AIAVDRAHRR RAQLEANEQL
QRILGSQRSL LRNVLAGDSL QALAATLGEL LGGAVLVADF SAGHVVGSAS ALPALYDDTQ
WTRWLAGSGG RELLGYIHDT LQHQRDGQVM LPLEGEHRLA AHIEALTVDD EQVGALLVVG
DAPPDTLRKL LLENACFALS VQLMRSVIRY RFETRTLTEL FSEIVERRFR DSEDVLARAR
RLGLPLAAPL RMLVVDFAGH GSHRNNLMLE CSRQVSGLAK QLQVPMHMVT LGSGLVCLLP
VDAEQVAVQA RFGRRIADAL GRVLGHEPIV VLGETFEGLE PLAIEWERCW RMIRVARDYG
RSGMLEMPDL GALPLLIGAA DATDVRHFIS GTLGKLIEYD KRNSAPYLET VTAYLRSGCR
SQLAADAMGL HVTTLRYRLA RIQELFGLDF DTPERRFALE LALQLHQLTT GAELGKR
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