| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2242 |
|---|
| Symbol | |
|---|
| ID | 6111195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2494943 |
|---|
| End bp | 2496004 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641622037 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001749111 |
|---|
| Protein GI | 170721423 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2855] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGG TACCGTCCAA CCCTGCCTTT GCCCCTACCT TCTCTACCCG AGGGCGGCTC
AACGGCATCC TGTTCGTCGC GTTGTTCGCG TTCGCCGTCA CCCAACTGGC GGCCATGCCC
GTTATCGCCA ACCTGGGCAT CAGCCCGCTG ATCGTCGGCA TCGTCGCCGG TGCCCTTTAC
GGCAACGCCC TGCGTGATAG CGTACCGGCC AGTTGGGCGG CGGGCATCAA TTTCTCTGCC
CGCGGGCTAC TGCGCATCGC GGTGGCCTTT TTCGGCCTGC GTGTCAGCCT GCAGGAAATC
GCCGAAGTCG GCTGGTCTGG CCTCACGGTC TCGCTGCTGG TGGTGGTCAG CACCCTGCTG
ATCGGCCTGT GGTGTGGCAT GAAGCTGCTC AAGCTGGACC GCGATACCGC CTTGTTGACA
GCAGCCGGCA GCGCCATTTG CGGCGCCGCA GCAGTGCTGG CCTTCGAATC GGCGCTGCGC
AGCGCACCGC ACAAGAGTGC CATGGCAGTG GGCAGCGTGG TGCTGTTCGG CACCCTGTCG
ATGTTCCTGT ACCCGCTACT GATCAACAGC GGCTGGCTGC ACCTCGATAC CCTGGGTGCC
GGCCTGTTCC TGGGCGGCAC CGTTCATGAG GTTGCTCAGG TGGTGGGCGC AGCAAGCAAT
GTCAGCCCCG AGGCCACGCA CATCGCTACC ATCGTCAAGA TGACCCGGGT GATGCTGTTG
GTGCCGGTAC TGCTGGTGGT GGGTGTCTGG ATCAGCCGTA CCCGGCTGCC GGGTCAGGCA
CAAGGCAACG GCCGCATCGC CATGCCATGG TTCGCCTTCG GCTTCCTCGC GCTGGTATTG
GTGAACTCGC TGCAGGTATT GCCAGGCAGC GTGACCCAAG CGGTCAACGG CCTGGACACC
TTCGCCCTGA CCATGGCCAT GACCGCACTG GGCATGGAGA CACGCTTGAG CCAGATCCGC
CAGGCCGGCC CGCGGGCGCT GGTGACAGGG GCGATTCTCA ACCTGTGGCT GCTCGGTGGC
GGGCTGGCGA TTACGCTGGG TGTGCAAAAG CTCTTCGCAT GA
|
|---|
| Protein sequence | MATVPSNPAF APTFSTRGRL NGILFVALFA FAVTQLAAMP VIANLGISPL IVGIVAGALY
GNALRDSVPA SWAAGINFSA RGLLRIAVAF FGLRVSLQEI AEVGWSGLTV SLLVVVSTLL
IGLWCGMKLL KLDRDTALLT AAGSAICGAA AVLAFESALR SAPHKSAMAV GSVVLFGTLS
MFLYPLLINS GWLHLDTLGA GLFLGGTVHE VAQVVGAASN VSPEATHIAT IVKMTRVMLL
VPVLLVVGVW ISRTRLPGQA QGNGRIAMPW FAFGFLALVL VNSLQVLPGS VTQAVNGLDT
FALTMAMTAL GMETRLSQIR QAGPRALVTG AILNLWLLGG GLAITLGVQK LFA
|
|---|
| |