| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2226 |
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| Symbol | |
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| ID | 6111179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2475843 |
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| End bp | 2476514 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622021 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001749095 |
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| Protein GI | 170721407 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.145555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATC CCGTTGCCCC CCTCGGCCAG CCCGAGATCG AAGGGACACG CAAGTCGCGC
AAGAACAACC CTGAAAAAAC CCGTGAGGAC ATCCTCCAGG CCGCCATCAA CGAGTTTGTC
CAGCAAGGCC TGGCAGGCGC GCGGGTGGAT GCCATCGCCG AGCGCACAGC CACTTCCAAG
CGCATGATCT ACTACTACTT CGGCAGCAAG GAGCAGCTGT ACGTCGAGTG CCTGGTCAAA
TTGTACGGCG ACATCCGCAA GACCGAGCAC CGCCTGGACC TGGAGTCGCT GCCGGCCGAG
CAGGCCATCC AGCGCCTGAC CGAGTTCACC TTCGACCATC ACGACCGCAA CGTCGATTTC
GTGCGCATGG TCTGCACCGA AAACATCCAC TACGGCGAGT ACGTGAAGAA AACCCCGGCC
ATCCGCGAGA TGAGCAGCCT GGTGCTGCAG GCGCTGGGCC GCACGCTGGA GCGGGGCGTG
CAAGAGGGGG TGTTCCGCCC GGGCATCGAG GTCATCGACC TGCACATGCT GATGAGCGCG
TTCTGCTTCT ATCGGGTCTC GAACCGCCAC ACCTTCGGCG ACATCTTCCA GATCGACCTG
CTCGATGAGC AGGTCAAACT GCGCCACAAG GCCATGATCT GCGAAGCAGT GATGCGTTAC
ATCCAGGCCT GA
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| Protein sequence | MSNPVAPLGQ PEIEGTRKSR KNNPEKTRED ILQAAINEFV QQGLAGARVD AIAERTATSK
RMIYYYFGSK EQLYVECLVK LYGDIRKTEH RLDLESLPAE QAIQRLTEFT FDHHDRNVDF
VRMVCTENIH YGEYVKKTPA IREMSSLVLQ ALGRTLERGV QEGVFRPGIE VIDLHMLMSA
FCFYRVSNRH TFGDIFQIDL LDEQVKLRHK AMICEAVMRY IQA
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