| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2202 |
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| Symbol | |
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| ID | 6111155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2448582 |
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| End bp | 2450081 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621997 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001749071 |
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| Protein GI | 170721383 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TCTACGACGA ACGGGTCGAT GGCGCGCTGC CTGCCGTGGA CCAGCCGGCC
CTGCTGCAGG CCTTGCGCGA AGCGCTGCCC GACCTTGAGA TCCTGCATCG GGGCGAAGAC
CTCACACCTT ACGAATGCGA TGGCCTCTCT GCCTACCGCA CCGTGCCCCT GATGGTGGTG
CTGCCAGAGC GTCTGGAGCA GGTGCAGACG TTGCTAAGGC TGTGTCACCA ACGCGGTGTC
CCTGTCGTGG CTCGCGGCGC CGGCACGGGC TTGTCAGGCG GCGCATTGCC ACTGGCCAAG
GGCATCCTGC TGGTGATGGC ACGTTTCAAC CGCATTCTGG AAGTCAACCC GCAAGGCTGT
TTCGCCCGGG TTCAGCCGGG GGTGCGCAAC CTGGCCATTT CCCAGGCAGC GGCGCCGTAC
GGCCTTTACT ACGCCCCCGA CCCCTCTTCG CAAATCGCCT GTTCCATCGG CGGCAACGTC
GCTGAAAACG CAGGTGGCGT GCACTGCCTG AAGTACGGCT TGACCGTGCA CAACCTGCTC
AAGGTGGAGA TCCTCACCGT CGAAGGCGAA CGGCTGACCC TGGGCAGCGA TGCCCTCGAT
AGCCCGGGTT TCGACCTGCT GGCGCTGTTC ACGGGTTCCG AAGGCATGCT CGGGATCGTC
ACCGAAGTGA CCGTCAAACT GCTGCCCAAG CCCCAGGTCG CCCGGGTCCT GCTGGCCAGT
TTCGGCAGTG TCGAAGACGC CGGCCGGGCC GTGGCCGAAA TCATTGCTGC CGGGATCATC
CCCGGTGGCC TGGAAATGAT GGACAACCTG GCAATCCGCG CCGCCGAAGA CTTCATCCAC
GCCGGCTACC CGGTAGAGGC AGCAGCGATC CTTTTGTGCG AACTCGATGG TGTCGAGGCC
GACGTGCAGG ACGACTGCGA GCGTGTGGCA GCAGTACTAC AGCAGGCCGG CGCCAGCGAG
GTGCGCCTGG CCTGCGACGA GGCCGAGCGC GTGCGCTTCT GGGCAGGCCG CAAGAACGCA
TTCCCGGCGG TGGGGCGCAT CTCGCCGGAC TACTACTGCA TGGACGGGAC CATCCCGCGC
CGCGAACTGG CGCGCGTGCT CAAGGGCATC AGCGAACTGT CCGAGCAGTA CGGCCTGCGC
GTTGCCAACG TGTTCCACGC CGGCGACGGC AACATGCACC CACTGATCCT GTTCGATGCC
AACCTGCCCG GCGAACTGGA ACGCGCCGAA GCCATCGGCG GGCGCATCCT TGAACTGTGC
GTGGCAGTGG GCGGCAGCAT CACCGGCGAA CATGGCGTAG GCCGCGAGAA AATCAACCAG
ATGTGCGCGC AGTTCAACAG CGACGAAATC ACCCTGTTCC ATGCCGTGAA GGCAGCGTTT
GACCCCAAAG GGCTGCTCAA CCCGGGCAAG AACATCCCCA CCCTGCACCG CTGCGCCGAG
TTCGGTGCCA TGCATGTGCA TCACGGCCAA CTGCCCTTCC CTGACCTGGA GCGCTTCTGA
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| Protein sequence | MNILYDERVD GALPAVDQPA LLQALREALP DLEILHRGED LTPYECDGLS AYRTVPLMVV
LPERLEQVQT LLRLCHQRGV PVVARGAGTG LSGGALPLAK GILLVMARFN RILEVNPQGC
FARVQPGVRN LAISQAAAPY GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
KVEILTVEGE RLTLGSDALD SPGFDLLALF TGSEGMLGIV TEVTVKLLPK PQVARVLLAS
FGSVEDAGRA VAEIIAAGII PGGLEMMDNL AIRAAEDFIH AGYPVEAAAI LLCELDGVEA
DVQDDCERVA AVLQQAGASE VRLACDEAER VRFWAGRKNA FPAVGRISPD YYCMDGTIPR
RELARVLKGI SELSEQYGLR VANVFHAGDG NMHPLILFDA NLPGELERAE AIGGRILELC
VAVGGSITGE HGVGREKINQ MCAQFNSDEI TLFHAVKAAF DPKGLLNPGK NIPTLHRCAE
FGAMHVHHGQ LPFPDLERF
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