Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2186 |
Symbol | |
ID | 6111139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2435233 |
End bp | 2435877 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641621981 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001749055 |
Protein GI | 170721367 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0785456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.820524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGGTC AGGATCACGA AACCGAAGCG TCCAGCGCAA CGGTCACCAA ACGCCGCCGT GCCCCCAAGG GCGAGATGCG CCGCGCCGCC CTGCTGGATG CGGCCACCGC CGTGTTCGCC AAAGACGGTT ATGCGGCAGC CTCCATGCGC GATGTGGCCG AAATCGCCGG CATCACCACG GTCGGGCTGT TGCACCACTT CCCCAACAAG GTGTCGTTGC TGCAGGCCTT GCTCGATCGG CGCGATCGGC GAGTGACGGA GAAATTTGCC GAGCTGGAGA TGGCGCCGAC GCTTGCGAAC TTCCTGGCCT TCGTGCGCAT GAGCATGAAT TTCAGCGTGC AGAACCTGCT TGAATGCCAG GCTTCGATGA TGATCAGCGT CGAAAGCCTG TCCGAGCAGC ACCCGGCCTG GCCCTGGTAC AAGGAGAAAT TCGCGCTGAC CCACGCCCAC GCCAAGGCGC ACCTGGCGGC GCTGGTCGAG CATGGCGAGG TGCGCAAGGA CATTGATGCG AAGTCGTTGG CGACCGAGAT CTTCGCCGTG ATGGATGGCC TGCAGATCCA GTGGCTGCGC GCCCCGGACC AGGTCGACGT CGAAGCGGTC TTCGACGCCT ACCTGCTACG CCTTGCCTCT TGCATCAAGG CCTAG
|
Protein sequence | MSGQDHETEA SSATVTKRRR APKGEMRRAA LLDAATAVFA KDGYAAASMR DVAEIAGITT VGLLHHFPNK VSLLQALLDR RDRRVTEKFA ELEMAPTLAN FLAFVRMSMN FSVQNLLECQ ASMMISVESL SEQHPAWPWY KEKFALTHAH AKAHLAALVE HGEVRKDIDA KSLATEIFAV MDGLQIQWLR APDQVDVEAV FDAYLLRLAS CIKA
|
| |