| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2154 |
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| Symbol | |
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| ID | 6111107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2399818 |
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| End bp | 2400588 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621949 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001749023 |
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| Protein GI | 170721335 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.935715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAC CCCAGACTCA CCCCCGCGAC CTGATTGCCG GTTTACAAAA AGGCCTGGCG
CTCATGCAGC TGTTCAACGC CGAGCAGCCA CGCCTGACAG TGCCCCAGGC GGCCAGGCAA
GCTGGCCTTA CGCCCAGCGC AGCGCGCCGA TTTCTGCTGA CCCTGGTGCA TGAAGGCTTC
GCCGAAACCG ACAACCGCCA CTACTGGCTG ACCCCCAAGG CCCTGCGTAT CGGCCAGGCC
TATGTGGACT CGGCGCAGTT GCCACGCATG CTGCGCCCGA TCGTCGAGCA AGTGGCGCGC
CAGACCCAGG AGCATGTCTC GGTGGGCACA CGCGACGATG ATGAAATCAT CCACTTGGTG
CGCAGCCGCT ACAGCCACAT CGCATCACTG TCGATACGGC CCGGCTCGCG GGTACCGATG
TATTGCACTG CCGGGGGGCG GGTCTGGCTG GCGGCCCTGG ACCAAGCGCA GCGCGATGAC
TACTTCGCCC GCAACCCGCT ACACCCTCTG ACGCCCTACA CCCAGACCGA CAGGGCGCTG
CTGGACGCGA CGTTGCAGCA GGTGAGCGAG CAGGGCTACT GCATCGTCGA TCAGGAGTTC
GAAGTCGGCA TGCGCGTAGT CGGCGTGCCG TTACTGGACC GGGCGGGGCA GCTCAAGGCG
ACACTGACCA TTACTACCCA TGCATCGCGG CTGAGCATGG ATGAGATACG GCTGCGTTAC
CTGCCACCGC TCTATGAGGC GCAGGCCTTG CTGAAACCGG TATTTGGCTG A
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| Protein sequence | MDKPQTHPRD LIAGLQKGLA LMQLFNAEQP RLTVPQAARQ AGLTPSAARR FLLTLVHEGF
AETDNRHYWL TPKALRIGQA YVDSAQLPRM LRPIVEQVAR QTQEHVSVGT RDDDEIIHLV
RSRYSHIASL SIRPGSRVPM YCTAGGRVWL AALDQAQRDD YFARNPLHPL TPYTQTDRAL
LDATLQQVSE QGYCIVDQEF EVGMRVVGVP LLDRAGQLKA TLTITTHASR LSMDEIRLRY
LPPLYEAQAL LKPVFG
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