| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2148 |
|---|
| Symbol | |
|---|
| ID | 6111101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2393063 |
|---|
| End bp | 2394115 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641621943 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001749017 |
|---|
| Protein GI | 170721329 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.896351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.223624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCCC CCCTTCGCAT CGCCCTGATT GGCGCCGGTA TCATGGGCCG CCAGCATTAC
CAGCATCTGA GCCAGGTGCC GCAAGCGCAG TTGTGCGCGG TGGCCGACCC CGGCCCCCAG
GCTGAAGCCT TCGCCGCCGA GTGCGGGGTG GCATATTTCG CCGATCACCG GCAGATGCTG
CAAACTGTGC GCCCCGAGGC CGTGATCGTG GCCAATCCGA ACAACCTGCA CGTGGCCACC
GCCCTCGATT GTGTCGAAGC CGGTGTGCCG GTATTGGTAG AAAAGCCAAT AGGAGTGCAC
CTGGATGAAG TGCGGGCGCT GGTGGAGGCG TCGCGCCGCT GTCGCGTGCC GGTGCTGGTC
GGCCACCACC GGCGGCATAA CCCGCTGATT GCCAGCGCGC GGGGCGTGAT CGCCGAAGGG
GCCTTGGGCC GGTTGGTCAA CGTCACCGCG CTGTGGCAGT TGCAAAAGCC CGACAGCTAT
TTCGACACCC CATGGCGCCG CGAGCCCGGC GCCGGTTTTC TGCTGACCAA CCTGATCCAC
GACCTCGACC TGCTGCGCTA CCTGTGCGGC GAGGTGGTAC AGGTGCAGGC GTTCACCCGT
AACCAGGTGC GCGGTTTTGC CAACGAGGAC AGCGCGGCAG TGCTGCTGGA GTTCGCCAAC
GGTGCGCTGG GCAGCCTGAC CGGCTCCGAC GCGGTGGCAG CGCCGTGGAG CTGGGAGCTG
AGCTCGGGAG AAAGCCCTGT CTATCCGCGC CAGGCGGACC AACCCTGCTA CCTGCTGGCC
GGCACCCGGG GAGCGCTGAG CATCCCGCAG CTCAAGCACT GGCAGTACGC CGAGGCAAAC
TCGGGTTGGC ATACACCGTT GCTGCAGAGC GAGGCAGGTA TCCCGGCGGG GGCGGCATTG
ACCCTGCAGT TGCAGCACTT TGTCCGTGTT GCCCGTGGGC AGGAAGCGCC ATTGACCGAT
GCCGCTGACG GTGGCCGCAC CTTGGCGTTG ATCGAGGCGA TCCGCCAGGC GGCCGCCAGC
GGCCGGGCTT GCGCGCCAGA GATCATCGTG TGA
|
|---|
| Protein sequence | MNAPLRIALI GAGIMGRQHY QHLSQVPQAQ LCAVADPGPQ AEAFAAECGV AYFADHRQML
QTVRPEAVIV ANPNNLHVAT ALDCVEAGVP VLVEKPIGVH LDEVRALVEA SRRCRVPVLV
GHHRRHNPLI ASARGVIAEG ALGRLVNVTA LWQLQKPDSY FDTPWRREPG AGFLLTNLIH
DLDLLRYLCG EVVQVQAFTR NQVRGFANED SAAVLLEFAN GALGSLTGSD AVAAPWSWEL
SSGESPVYPR QADQPCYLLA GTRGALSIPQ LKHWQYAEAN SGWHTPLLQS EAGIPAGAAL
TLQLQHFVRV ARGQEAPLTD AADGGRTLAL IEAIRQAAAS GRACAPEIIV
|
|---|
| |