Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2147 |
Symbol | |
ID | 6111100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2392121 |
End bp | 2392897 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641621942 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001749016 |
Protein GI | 170721328 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.197255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGTA GTCAGATCGA ACGCGCCTTC AGTCTTGTAG AAAGCCTTGC CGCCGAGCCC CAGGGCCTGG GCCTGCAAAC CCTCGCTGAC CAGCTTCAGA TCCCCAAGAG CGCAGCCCAT CGCATGCTCG CTGAACTCGC GCGTCTGGGC TACGTACGCC AGAACCGTGA CAACAGCCGC TATCAGTTGT CCGCCAAGCT GGTGGCGCTG GGCTTTCGCT ATCTGTCCAG CAGCGGCGCC GACATCATCC AGCCGATACT CGACCGCCTG GCCCAGGAAA GCGGCGAGCT GGTGCGCCTG GGCGTGATCG ACGGCGCCCG CCAGACCTGG ATCGCCAAAT CCCAGGGCGC GCGGTCCGGT TTGCGTTACG ACCCGGACAT GGGCCGCGAT GCGCCCCTGT TCTATACCGC CTCCGGGCAT GCCTGGCTGG CCAGCCTGAG CGATGACGAG GCGCTGCAAA TGGTCCTGCG CCAGGGCATT GCCGACCCCG AGCAGTTCGG CCCCAACGCG CCGCGCTCCA CCGAACAGCT GCTGAGTTAC CTGGCGGGCG CCCGTGAGCG GGGTTATGCC TGGGTCGAGC AAACCTCGGC AGTCGGTACC TCGGCCCTGG CTGCGGTGGT GCGCCGGCCG CAAGGTAATG AGGTCATTGG CGTGCTAAGC ATTGCCGGGC CCAGTGCGCG CCTTTCGCAA GCACGCCTGC CGGAGCTTGC GCCTTTATTG TTGGCGGCTG TGGAGGAGTT GTCGGCAGCC AGCCAGGCGA GTGAGTTGTT TGCTTGA
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Protein sequence | MAGSQIERAF SLVESLAAEP QGLGLQTLAD QLQIPKSAAH RMLAELARLG YVRQNRDNSR YQLSAKLVAL GFRYLSSSGA DIIQPILDRL AQESGELVRL GVIDGARQTW IAKSQGARSG LRYDPDMGRD APLFYTASGH AWLASLSDDE ALQMVLRQGI ADPEQFGPNA PRSTEQLLSY LAGARERGYA WVEQTSAVGT SALAAVVRRP QGNEVIGVLS IAGPSARLSQ ARLPELAPLL LAAVEELSAA SQASELFA
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