Gene PputW619_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2147 
Symbol 
ID6111100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2392121 
End bp2392897 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID641621942 
ProductIclR family transcriptional regulator 
Protein accessionYP_001749016 
Protein GI170721328 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.197255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTA GTCAGATCGA ACGCGCCTTC AGTCTTGTAG AAAGCCTTGC CGCCGAGCCC 
CAGGGCCTGG GCCTGCAAAC CCTCGCTGAC CAGCTTCAGA TCCCCAAGAG CGCAGCCCAT
CGCATGCTCG CTGAACTCGC GCGTCTGGGC TACGTACGCC AGAACCGTGA CAACAGCCGC
TATCAGTTGT CCGCCAAGCT GGTGGCGCTG GGCTTTCGCT ATCTGTCCAG CAGCGGCGCC
GACATCATCC AGCCGATACT CGACCGCCTG GCCCAGGAAA GCGGCGAGCT GGTGCGCCTG
GGCGTGATCG ACGGCGCCCG CCAGACCTGG ATCGCCAAAT CCCAGGGCGC GCGGTCCGGT
TTGCGTTACG ACCCGGACAT GGGCCGCGAT GCGCCCCTGT TCTATACCGC CTCCGGGCAT
GCCTGGCTGG CCAGCCTGAG CGATGACGAG GCGCTGCAAA TGGTCCTGCG CCAGGGCATT
GCCGACCCCG AGCAGTTCGG CCCCAACGCG CCGCGCTCCA CCGAACAGCT GCTGAGTTAC
CTGGCGGGCG CCCGTGAGCG GGGTTATGCC TGGGTCGAGC AAACCTCGGC AGTCGGTACC
TCGGCCCTGG CTGCGGTGGT GCGCCGGCCG CAAGGTAATG AGGTCATTGG CGTGCTAAGC
ATTGCCGGGC CCAGTGCGCG CCTTTCGCAA GCACGCCTGC CGGAGCTTGC GCCTTTATTG
TTGGCGGCTG TGGAGGAGTT GTCGGCAGCC AGCCAGGCGA GTGAGTTGTT TGCTTGA
 
Protein sequence
MAGSQIERAF SLVESLAAEP QGLGLQTLAD QLQIPKSAAH RMLAELARLG YVRQNRDNSR 
YQLSAKLVAL GFRYLSSSGA DIIQPILDRL AQESGELVRL GVIDGARQTW IAKSQGARSG
LRYDPDMGRD APLFYTASGH AWLASLSDDE ALQMVLRQGI ADPEQFGPNA PRSTEQLLSY
LAGARERGYA WVEQTSAVGT SALAAVVRRP QGNEVIGVLS IAGPSARLSQ ARLPELAPLL
LAAVEELSAA SQASELFA