Gene PputW619_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2142 
Symbol 
ID6111095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2385846 
End bp2386598 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID641621937 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_001749011 
Protein GI170721323 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.112769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC CCTACCGTAT CGGCCAGATC GTGCCGAGTT CGAACACCAC CATGGAAACC 
GAGATCCCGG CGATGCTCCT GGCCCGCCAG GCGATCCGCC CGGAGCGCTT CACCTTCCAC
TCCAGCCGCA TGCGCATGAA GCAGGTGAAG AAGGAAGAAC TGGCGGCGAT GGACGGCGAG
TCCGACCGCT GCGCAGTGGA ACTGTCAGAC GCCAAGGTGG ACGTGCTCGG CTATGCCTGC
CTGGTGGCGA TCATGGCCAT GGGGCTGGGG TATCACCGCC AGTCAGAGAA GCGGTTGCAA
AAAGCCACTG CCGACAACGA CGCACTGGCG CCGGTCATCA CCAGTGCCGG TGCGCTGGTG
GAGGCCCTGC ACGTGATGAA GGCCAAGCGC ATCGCCATCG TCGCGCCCTA CATGAAGCCG
TTGACCGAAC TGGTGGTCAA CTACATCAGC GAGGAAGGCT TCGAGGTGCA GGACTGGCGC
GCGCTGGAAA TCCCCGACAA CCTCGCCGTG GCACGTCACG ACCCGGCCAA CCTGCCGGGC
ATCGTGGCCG GCATGAACCT TGAGGGCGTC GATGTGGTGG TGCTTTCGGC CTGCGTGCAG
ATGCAGTCGC TGCCGGCAGT CGCCAAGGTC GAGGCGCAAA CCGGCAAACC GGTGGTCACC
GCTGCCATCG CCACCACCTA CGCCATGCTC AAGGCGCTGG ACCTGGAACC GGTGGTTCCG
GGCGCTGGCG CCTTGCTGTC GGGCGCCTAC TGA
 
Protein sequence
MTKPYRIGQI VPSSNTTMET EIPAMLLARQ AIRPERFTFH SSRMRMKQVK KEELAAMDGE 
SDRCAVELSD AKVDVLGYAC LVAIMAMGLG YHRQSEKRLQ KATADNDALA PVITSAGALV
EALHVMKAKR IAIVAPYMKP LTELVVNYIS EEGFEVQDWR ALEIPDNLAV ARHDPANLPG
IVAGMNLEGV DVVVLSACVQ MQSLPAVAKV EAQTGKPVVT AAIATTYAML KALDLEPVVP
GAGALLSGAY