Gene PputW619_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2134 
Symbol 
ID6111087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2377086 
End bp2377724 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID641621929 
ProductTetR family transcriptional regulator 
Protein accessionYP_001749003 
Protein GI170721315 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.175968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTC GCAAAACCGG TGTTCGCGCC CAGCAGGCAG ACCGCACCAG GCACAACATT 
CTTCAGGCGG CGGTGAAGGT CTTCAGCAAG GAAGGCTTCA CTGGCGGGCG CATCGAGCAG
ATATCCTCGC TGGCAAACTC CAATGACCGG ATGATCTACT ACTACTTCGG CAACAAGGAA
AAGCTGTTCA TCAGCGTGCT GGAGCACATC TACGCAAGTT TCAATCAAGC CGAAGCCAAG
CTTCGACTGG ACCTCACCGA CCCCGAGGCG GCACTGCGTA AGCTGGTGGC GTTCATCTGG
GACTACTACG TGCGCCATCC CGAATTCGTC ACCCTCCTGG CCACAGAGAA CCTCCATCAG
GGCAAGCACG TCAGGCAGTC GCAAAACCTG AAAGCGCTGT CCGGCGAGGC TGTCGGCGTA
CTGCGGCCGA TCGTCGAGGC GGGCCAGGCC AAGGGCGTGT TCCGCAAGGA TATCGACATC
AGGCACACCT ACCTGATGAT TGCCTCGCTG TGCTATTTCT ATAACTCCAA CCGCTACACG
CTCAGTTCGT TTCTTGCCGT GGACCTGGCC GATAAACAGG CCAAGTCCGA CTGGCTGGCG
TTCATCAGCG ACCTGGCCTT GCGCGGGCTG CGCTGCTGA
 
Protein sequence
MQTRKTGVRA QQADRTRHNI LQAAVKVFSK EGFTGGRIEQ ISSLANSNDR MIYYYFGNKE 
KLFISVLEHI YASFNQAEAK LRLDLTDPEA ALRKLVAFIW DYYVRHPEFV TLLATENLHQ
GKHVRQSQNL KALSGEAVGV LRPIVEAGQA KGVFRKDIDI RHTYLMIASL CYFYNSNRYT
LSSFLAVDLA DKQAKSDWLA FISDLALRGL RC