| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2121 |
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| Symbol | |
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| ID | 6111074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2355108 |
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| End bp | 2357276 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621916 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001748990 |
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| Protein GI | 170721302 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0440064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.552205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGC CACTCGCGCC CTCGCGCCAT CTCCCTGCCC GCAACCTGCT CGCCATGGCC
GTGTGCATGG CCATCGTCAC ACCGGCCTTG GCCGAAGACG ACCAGCCCAC CACGCTGGTG
TTGGGCGCCA CCGAGATCAG CTCCGATCGG CTGGGCAGCA CCACCGAGGG TTCGCAGTCC
TACACCACAG GTTCCATGGC CACCGCCACC AAGCTGCCAT TGAGCCTGCG TGAAACACCG
CAGGCGGTGA CCGTGATTAC CCGTCAGCGC ATGGACGACC AGGCGATGAC CAGCATCAAC
GACGTGGTCA AGGCTACGCC AGGGCTGTTC CTTGACTATT CCGGCGGTCC AGGTCGGCAA
AACTACATCT CGCGTGGCTT TGACATCGAC AACCTGATGT ACGACGGCAT TCCGAGCGGT
TACAAGCCGT ATACCGTAGG TGCCCAGCCT AACCTGGCCA TGTTCGACCG CGTCGAGATC
GTCCGCGGTG CGACCGGCCT GATCACCGGC TCCGGCAACC CTTCGGCGGC CATCAACCTG
GTACGCAAGC GTCCGCTGGC CGAACAGAAG GTCACCCTGA CCGGCGCCGC TGGCAGCTGG
GACGACTACC GCGGCGAAAT CGATGCCTCC AGCCCGCTCA ACGACAGTGG CACACTGCGC
GGCCGCGTGG TGACGTCATA CCGGGGGGCC AACAGCTACA TCGATGACGT CGAACAAGAC
CACGGCCTGT TCTATGCAAT CACCGAGGCG GACCTGTCCG AAGACACCAC ACTGACCCTC
GGCTTCTCTC ACCAGAAAGA CCAGACCAAC AACTTCTGGG GCGCCATGCC AACCGCCCTG
AACGGCCACC ACATGGACTT CTCGCGTTCC TACAACCCAG GCAGTGACTG GGAAAACAAG
GATCAGGAGA TCAACACCGT ATTCGCCGAA GTGCAGCAGC GCCTGGCCAA TGACTGGAAA
CTTCAGGTCA ACGCCAACTA TTCCCAGCAA GACGGCACCT TCACCGGCTC CTACCAGTCG
CGCTGGGCCG GGCTCAATAA GCCGTTGTCC CGCACCGCTT ACCAGTCCAA GCACCAGGAA
AACCAGGCCG GCCTTGACGG CTTCGTCAGC GGCCCGTTCG AAGCGTTTGG CCGCACCCAC
GAGCTGGTGG TGGGCGCCAG CAAGCGCATC TACGACATGG ACACACGCAA CTACAGCCCA
TACGACACCA ACTGGCCGAT CGATGGCGGC AAGCCGAACT TCGTGCACAC CAACAACGTA
CGCGAAGTCA CCACCCAGGA AGGCGTGTAC ATGACCACCC GGCTGAGCCT GGCCGATCCG
CTGAAGCTGA TCCTGGGCGG CCGCCTGGAC TGGTATGACT ATGACAACAA GGAAAGTGCC
AGCGCCGATT ACAAAGTCAC GCGCAACGTC ACTCGCTACG CGGGCCTGAT CTACGACCTG
GACGATCATC ACTCGGTGTA TGTCAGCTAC AGCGACATCT TCAACCCGCA GGAGTACAAG
GACGCTTCCG GCAGCCCGCT CAAGCCGGTC GAGGGCAAGA ACTATGAAAT CGGCGTCAAG
GGCGAGTACT TCGATGGCGC CCTCAATGCC AGCGTGGCGC TGTTCCGTAT CGACCAGGAA
AACCGTGGCG TTTCGCAGAC CGACCTGGCC GGCTGCAGCG ACCCGACCAA CTGCTACGTC
GCCTCTGGCG AGGTACGCAG CCAAGGTATC GACATGGAGC TGCAAGGTGC GCTGACCCGC
AACTGGCAGG TCGGTGCCGG CTACACTTAT GCCCGCGTCC ACACCCTCAA GGACGCCGCC
AACCCAGGCA ACGTCAACCA GCGCTTCGAC ACCGATACCC CCGAGCACCT GTTCAAGCTG
ACCACCACCT ACCGCTTCGA GGGCCCGCTT GAGAAGCTGC GCATCGGTGG CAACATCTCC
TGGCAGAGCC GCATCTACAA CGACTTCACC GTTGCCGATG GCAGCGAGTA CCGCCTGGTC
CAGGGGTCGT ACGCGGTCAC CGACCTGATG GCCGGCTACC AGGTCAACAA GCACCTCGAC
CTGCAACTCA ACGCCAACAA CGTGTTCGAT CGCAAGTACT ACTCGGCTGT GGCCAACTCG
GTCAACTATG CCGGCGACAC CTGGGGCGCG CCGCGCAACA TGATGCTGAC GGCCAAGTAC
AGCTTCTGA
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| Protein sequence | MPSPLAPSRH LPARNLLAMA VCMAIVTPAL AEDDQPTTLV LGATEISSDR LGSTTEGSQS
YTTGSMATAT KLPLSLRETP QAVTVITRQR MDDQAMTSIN DVVKATPGLF LDYSGGPGRQ
NYISRGFDID NLMYDGIPSG YKPYTVGAQP NLAMFDRVEI VRGATGLITG SGNPSAAINL
VRKRPLAEQK VTLTGAAGSW DDYRGEIDAS SPLNDSGTLR GRVVTSYRGA NSYIDDVEQD
HGLFYAITEA DLSEDTTLTL GFSHQKDQTN NFWGAMPTAL NGHHMDFSRS YNPGSDWENK
DQEINTVFAE VQQRLANDWK LQVNANYSQQ DGTFTGSYQS RWAGLNKPLS RTAYQSKHQE
NQAGLDGFVS GPFEAFGRTH ELVVGASKRI YDMDTRNYSP YDTNWPIDGG KPNFVHTNNV
REVTTQEGVY MTTRLSLADP LKLILGGRLD WYDYDNKESA SADYKVTRNV TRYAGLIYDL
DDHHSVYVSY SDIFNPQEYK DASGSPLKPV EGKNYEIGVK GEYFDGALNA SVALFRIDQE
NRGVSQTDLA GCSDPTNCYV ASGEVRSQGI DMELQGALTR NWQVGAGYTY ARVHTLKDAA
NPGNVNQRFD TDTPEHLFKL TTTYRFEGPL EKLRIGGNIS WQSRIYNDFT VADGSEYRLV
QGSYAVTDLM AGYQVNKHLD LQLNANNVFD RKYYSAVANS VNYAGDTWGA PRNMMLTAKY
SF
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