| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2114 |
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| Symbol | |
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| ID | 6111067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2347693 |
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| End bp | 2348397 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621909 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001748983 |
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| Protein GI | 170721295 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACG AAAAAGTAGC AATCGTGATC GCCGGCGGCA GTGGTATGGG CGCCGCGGCA
GCCAGGCGCC TGGCTGCCGA CGGCTTCAAT ATCGGTATCC TGTCGTCGTC TGGCAAAGGC
GAGGCGTTGG CCGAGACGCT GGGCGGGATT GGCGTGACCG GCAGCAACCA GTGCAACGAC
GACATCAAGC GCCTGGTCGA TGCCGTAGTC GCCAAATGGG GCCGTATCGA TGTGCTGGTC
AACAGTGCAG GCCACGGTCC GCGCGCGCCG ATCCTTGAAA TCAGCGATGC AGACTGGCAC
CAGGGCATGG AGACCTACCT GCTCAATGTC ATCCGCCCGA CGCGGCTGGT CACGCCCATC
ATGCAGCGCC AGCAGGGTGG GGTAGTGATC AACATTTCCA CCGCCTGGGC CTTCGAGCCG
AGTGAAATGT TCCCCACCTC GGCCGTATTC CGCGCGGGCC TGGCGGCGTT CAGCAAGATC
TTCGCCGACA CCTATGCTGC GGACAATATC CGCATCAACA ACGTACTGCC GGGCTGGATC
GACAGCCTGC CGGCCACTGA CCAACGCCGT GACAGCGTGC CGCTCAAGCG CTATGGCAGC
AGCGAGGAAA TCGCCGCCAC CGTAGCCTTC CTGGCCAGCG ATGGCGCGGC GTACATCACC
GGGCAGAACA TCAGGGTCGA TGGCGGTATT ACCCGCAGCA TTTGA
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| Protein sequence | MSNEKVAIVI AGGSGMGAAA ARRLAADGFN IGILSSSGKG EALAETLGGI GVTGSNQCND
DIKRLVDAVV AKWGRIDVLV NSAGHGPRAP ILEISDADWH QGMETYLLNV IRPTRLVTPI
MQRQQGGVVI NISTAWAFEP SEMFPTSAVF RAGLAAFSKI FADTYAADNI RINNVLPGWI
DSLPATDQRR DSVPLKRYGS SEEIAATVAF LASDGAAYIT GQNIRVDGGI TRSI
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