| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2089 |
|---|
| Symbol | |
|---|
| ID | 6111042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2323944 |
|---|
| End bp | 2324690 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641621884 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001748958 |
|---|
| Protein GI | 170721270 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.182064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG CCGCCAACCT CGTTGTGCGC GGCGGGCCCG GCATCGAATT CGCAGGCATC
GACCTGACGC TCGGCCGCAC GCGCATCCTC GAGCAGGTCC GGTTCAACGT CGCCGCCGGC
AGCGTGCATG CCATCGTCGG GCCCAACGGC GGCGGTAAAA GCTCGCTGAT CAAGACCCTG
CTCGGGCAGA TGCCACACCA GGGCCAACTG ACCCTGCACT GGCCGGGCGA GCACCAGGTG
ATCGGTTACG TGCCCCAGGC GCTGGAGTTC GACCGCGGCC TGCCGATGAC CGTGGACGAC
TTCATGGCCG CAATGTGCCA ACGCCGCCCG GCCTTTCTCG GCCTTTCGCG TCGCGTGCAA
CCGGCAATCG ACGCAGCGCT GGCGCAGGTA GGCATGCTCG ACAAACGCAA GCGGCGCATG
GGCGCGTTAT CGGGTGGCGA ACGCCAGCGC GTGCTGCTGG CCCAGGGTTT GATCCCCGAG
CCGCAGTTGC TGGTGCTCGA CGAACCCATG TCGGCGCTCG ATGAAGCCGG CATCCAGGTG
TTCGAGCACT TGCTGCACGG CTGGCGCCAG GCCGGCACCA CCGTGCTGTG GATCGAACAC
GACCTGCAAG CAGTGTTGCG CTTGGCCGAC CGGGTCACCG GGCTGAGCCG CCAGGTACTG
TTCGACGCCC CACCTGCTCA AGCCCTCACC CCGGAACGCC TGCTGAGCCT GTTCTCCGTA
CACCCGCGCA GCGAGGGTCG CACCTGA
|
|---|
| Protein sequence | MTAAANLVVR GGPGIEFAGI DLTLGRTRIL EQVRFNVAAG SVHAIVGPNG GGKSSLIKTL
LGQMPHQGQL TLHWPGEHQV IGYVPQALEF DRGLPMTVDD FMAAMCQRRP AFLGLSRRVQ
PAIDAALAQV GMLDKRKRRM GALSGGERQR VLLAQGLIPE PQLLVLDEPM SALDEAGIQV
FEHLLHGWRQ AGTTVLWIEH DLQAVLRLAD RVTGLSRQVL FDAPPAQALT PERLLSLFSV
HPRSEGRT
|
|---|
| |