| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2079 |
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| Symbol | |
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| ID | 6111032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2315233 |
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| End bp | 2316768 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621874 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001748948 |
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| Protein GI | 170721260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.352651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ACGCTGCGGC GCAGTTCACC CCGCCGAGCC TGCTGCTGAC CACCATAGGC
CTGTCGCTGG CGACGTTCAT GCAGGTGCTC GACACCACCA TCGCCAACGT CGCCTTGCCG
ACCATTTCCG GCAACCTGGG GGTGAGTTCC GAGCAGGGCA CCTGGGTGAT CACCTCGTTC
GCGGTGAGCA ATGCCATCGC GTTGCCGTTG ACCGGTTGGC TCAGCCGGCG CTTCGGTGAG
GTCAAACTGT TCATCTGGGC CACGCTGCTG TTCGTACTGG CGTCTTTTCT GTGCGGTATC
TCGCAGTCGA TGCCGGAGCT GGTGGGCTTT CGTGTGCTGC AGGGGGTGGT GGCCGGGCCG
CTATACCCGA TGACTCAGAC CTTGCTGATT GCTGTCTACC CGCCGGCCAA ACGGGGGATG
GCGCTGGCGT TGCTGGCGAT GGTCACGGTG GTGGCGCCGA TTGCCGGGCC GATCCTGGGC
GGGTGGATCA CCGACAGTTA CAGCTGGCCT TGGATCTTCT TCATCAACGT GCCGATCGGC
CTGTTCGCTG CCGCAGTGGT GCGCCAGCAG ATGCGCGCAC GGCCAGTGGT GACCAGCCGC
CAGCCCATGG ACTACATCGG CCTGCTGACC TTGATTGTCG GTGTGGGCGC ATTGCAAGTG
GTGCTCGACA AGGGCAATGA CCTGGACTGG TTCGAGTCGT CGTTCATCAT TATCGGCAGC
CTGATCTCGG TCGTGTTCCT GGCGATATTC ATCATCTGGG AGCTGACTGA CCGCCACCCG
GTGGTCAACC TGCGGCTTTT CGCGCACCGT AATTTCCGCA TCGGTACCAT TGTGCTGGTG
GGAGGCTACG CAGGCTTTTT CGGCATCAAC CTGATCCTGC CCCAGTGGCT GCAGACGCAG
ATGGGCTACA CCGCCACCTG GGCAGGCCTG GCGGTGGCAC CGATCGGCCT GCTGCCGGTG
ATCATGTCGC CGTTCGTGGG CAAGTACGCG CAGCGTTTCG ACTTGCGGGT GCTGGCGGGG
TTGGCGTTCC TGGCCATCGG TGCCAGCTGT TTCATGCGCG CGGGGTTCAC CAACGAGGTG
GACTTCCAGC ACATTGCCCT GGTGCAGCTG TTCATGGGGA TTGGTGTAGC GCTGTTCTTC
ATGCCGACCT TAAGCATTCT GCTGTCGGAC CTGCCGCCGC ACCAGATCGC CGACGGGTCT
GGCCTGGCGA CGTTCCTGCG GACCTTGGGC GGCAGCTTTG CGGCGTCGTT GACCACGTGG
ATCTGGATCC GCCGGGCGGA CCAGCATCAT GCCTACCTGA GCGAGAACAT CAGCCAGTTC
GACCCGGCGA CGCGGCATAC GCTGGAGCAA CTGGGCGGGG CAAACCCGCA AAGCTATGCG
CAGCTGGAGC AGATACTCAA CGGGCAGGCC TACATGATGT CGACGGTGGA CTACTTCACC
TTGATGGGCT GGGTGTTTGC CGGGTTGATT CTGCTGGTGT GGTTTGCCAA GCCGCCGTTT
GCTGCCAAGG CGGGGCCGGC TTCAGCGGGG CATTGA
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| Protein sequence | MSNNAAAQFT PPSLLLTTIG LSLATFMQVL DTTIANVALP TISGNLGVSS EQGTWVITSF
AVSNAIALPL TGWLSRRFGE VKLFIWATLL FVLASFLCGI SQSMPELVGF RVLQGVVAGP
LYPMTQTLLI AVYPPAKRGM ALALLAMVTV VAPIAGPILG GWITDSYSWP WIFFINVPIG
LFAAAVVRQQ MRARPVVTSR QPMDYIGLLT LIVGVGALQV VLDKGNDLDW FESSFIIIGS
LISVVFLAIF IIWELTDRHP VVNLRLFAHR NFRIGTIVLV GGYAGFFGIN LILPQWLQTQ
MGYTATWAGL AVAPIGLLPV IMSPFVGKYA QRFDLRVLAG LAFLAIGASC FMRAGFTNEV
DFQHIALVQL FMGIGVALFF MPTLSILLSD LPPHQIADGS GLATFLRTLG GSFAASLTTW
IWIRRADQHH AYLSENISQF DPATRHTLEQ LGGANPQSYA QLEQILNGQA YMMSTVDYFT
LMGWVFAGLI LLVWFAKPPF AAKAGPASAG H
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