Gene PputW619_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2038 
Symbol 
ID6110991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2269117 
End bp2270229 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content66% 
IMG OID641621833 
ProductABC transporter related 
Protein accessionYP_001748907 
Protein GI170721219 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0539483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TGAAGATCCG CAACCTGCAC AAAGGCTTCG ATGGCCACGC CATCATCAAG 
GGCATCGACC TGGAGGTGCG CGACCGTGAG TTCGTGGTGT TCGTCGGCCC GTCCGGGTGT
GGCAAGTCGA CACTGCTGCG GCTGATCGCC GGCCTTGAGG AAGTCAGCGG CGGCCACATC
ACCCTGGACG GCGTCGACAT CACTGACACC GCCCCGGCCA AACGCGACCT GGCCATGGTG
TTCCAGACCT ACGCGCTTTA CCCACACATG ACCGTACGCA AGAACCTGTC GTTCGCCCTG
GACCTGGCCG GCGTGGACAA GCGTGAGGTG CAGGCCAAGG TCGACAACGC CGCGCGCATC
CTCGAACTGC AACCGCTGCT CGAACGCAAG CCGCGCCAAC TGTCGGGTGG CCAGCGTCAG
CGGGTGGCGA TCGGCCGGGC GATCGTGCGC AACCCAAAGA TTTTCCTGTT CGACGAGCCG
CTGTCGAACC TTGACGCCGC CCTGCGCGTG CAGATGCGCC TGGAGCTCGC GCGCCTGCAC
CAGGAGCTGG CCGCGACCAT GATCTACGTG ACCCACGACC AGGTCGAGGC GATGACCCTG
GCCGACAAGG TGGTGGTGCT CAACGGCGGG CGCATCGAGC AGGTCGGCTC GCCGCTGGAG
CTGTACCACC ACCCGGCCAA CCTGTTCGTC GCAGGCTTTC TCGGCACCCC GAAAATGGGC
TTTTTGCGCG GCCACGTGAG CCACAGCCAG GGCACATCGT GCGAGGTCAC CCTTGAATGC
GGCGCCCGTG TCAGCTTGGC GCTGTGCGCG GACGGTCTGC CCGCTGGCAG CCCCGTGACA
CTGGGCATCC GCCCGGAGCA CCTGAACATC GCCAGCGCCG GGCAAGGCAC ACCCGGCTTG
CTGCAGGTGA CTGCCGACGT CAGTGAGCGC CTGGGCAGCG ACAGCTACTG CCATGTACGT
GCCGGCTCCG GGGAAATGCT CACCGTACGG GTGCGCGGCG ACTTTGCGCC GGCCTTCGGC
GAGCCCCTGG AACTGACGTT CGACCCAGGC CACTGCCACC TGTTCGACAG CAACGGCCAG
GCCTTGGACA AACGCCTGCA GCAAGCGGCC TGA
 
Protein sequence
MADLKIRNLH KGFDGHAIIK GIDLEVRDRE FVVFVGPSGC GKSTLLRLIA GLEEVSGGHI 
TLDGVDITDT APAKRDLAMV FQTYALYPHM TVRKNLSFAL DLAGVDKREV QAKVDNAARI
LELQPLLERK PRQLSGGQRQ RVAIGRAIVR NPKIFLFDEP LSNLDAALRV QMRLELARLH
QELAATMIYV THDQVEAMTL ADKVVVLNGG RIEQVGSPLE LYHHPANLFV AGFLGTPKMG
FLRGHVSHSQ GTSCEVTLEC GARVSLALCA DGLPAGSPVT LGIRPEHLNI ASAGQGTPGL
LQVTADVSER LGSDSYCHVR AGSGEMLTVR VRGDFAPAFG EPLELTFDPG HCHLFDSNGQ
ALDKRLQQAA