| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2031 |
|---|
| Symbol | |
|---|
| ID | 6110984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2261315 |
|---|
| End bp | 2261926 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641621826 |
|---|
| Product | ankyrin |
|---|
| Protein accession | YP_001748900 |
|---|
| Protein GI | 170721212 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.137275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGC GGGCCGACGG CCCGCTCTTC GTTTCTACGC AGGTAAACAC CATGCACAAA
TGGATGATGG CAGCCGTGTG CGGCTTGCTG ATCCTCACCG CCCAGGCACA AGAGCCACTG
CCGCCCCAAG GGCAAGACAC CAACACCGAG CAGCGGTTGC GCGATTACTT CTTCGGGGCC
GCACGCCGCG GGGATGAAGC AATGCTCAAA ACATTCATCC AGGCGGGCTA CAACCTGGAT
ACCCCTGACG AAAAAGGCTA CACAGGCCTG ATTCTGGCGG CCTACCACGG TCAGCAAGCA
GCCGTGGAAC AATTGCTGGC GGCCGGCGCC GACCCATGCG CCCAGGACAA GCGGGGTAAC
ACTGCGTTGA TGGGGGCAAT CTTCAAAGGC GAGGTGCGCA TTGCCAGGCG CCTGATCGAC
GCCACATGCA ACCCTGACCA GCGCAATGGC GCAGGCCAGA CAGCAGCCAT GTATGCGGTC
ATGTTTCAGC GCAAGGAATT GCTCGACGCG CTGACGGCCC ATGGCGCTGA TATCGAAGCA
ACAGATGCAT TGGGCAACAG CGTGCAAAGC CTGCAACAGG GTGAGCTCAA CGGCGTATCA
GCGCAACGCT GA
|
|---|
| Protein sequence | MTERADGPLF VSTQVNTMHK WMMAAVCGLL ILTAQAQEPL PPQGQDTNTE QRLRDYFFGA
ARRGDEAMLK TFIQAGYNLD TPDEKGYTGL ILAAYHGQQA AVEQLLAAGA DPCAQDKRGN
TALMGAIFKG EVRIARRLID ATCNPDQRNG AGQTAAMYAV MFQRKELLDA LTAHGADIEA
TDALGNSVQS LQQGELNGVS AQR
|
|---|
| |