| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2029 |
|---|
| Symbol | |
|---|
| ID | 6110982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2258548 |
|---|
| End bp | 2259741 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641621824 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001748898 |
|---|
| Protein GI | 170721210 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG TCGAACTGCC CAACCTGATG CAAGTACGCG CGTTCATCCG GGTCGCCGAG
TTGGGCAGCG TTTCGCGGGC GACGCAGGTG TTGTTCCGTG CTCAGTCCGT GGTCACCCGG
GCCATCGCCG AGCTGGAGGC GCGGTTCGCT GTTCCGCTGT TCGAGCGCCA TGCCAATGGC
ATGCGCCTGA CCGACTATGG CGAGTGCCTG CTGCCGCGTG CACAGCGCGT GCTGGCGGAA
CTGGACGGCG TGCCGGGGTT GATGGGCACC GCGCAGGGCG AGCCCCTGTA TCTGTTTCAG
GCGCGGCGCC TGCAGGTGTT CGTGAAACTC TGTGAAACAC GGCACATGCA AACCGTGGCG
CGGCACTTCG GCCTTAGCCA GCCGGCCGTC AGTGCTGCTT TGAAAGTGCT CGAAGGCGGG
TGCGGGCAGC CCTTGTTCGT GCGCACGTCG CGCGGCCTGC AGCCCACTGT GGCCAGCCGG
GACATTCTTT TCCCCATCCG CCGGGCGCTG AACGAGTTGC GCCACCTGGA CAGTGACCTG
AGTGCGATGC AAGGCACCCT GCGCGGGGTG GTGCATGTCG GCGCGTTACC CTTGGGCCGC
TCGCGCATTC TGCCGGAGGC CATTTTGCGT TTTACCGCCC AGCACCTACA GGTCCGGGTG
GTGACCAACG AAAGCCCGTT CGACCTGCTG GCAACCGAAT TACGGGTAGG GGATGTGGAC
TTCGTGCTGG GCGCCTTGCG GCCTCACGAC TATGCCAGCG ACCTGGTGGG CGAGCCGCTC
ATCAACGAGG AAATGGTGTT GCTGGCCCGC CGGGGGCACC CGCTGTTGCA CACCCCCCTT
ACGCTCAAGG GCGTGCACCA GGCGCGCTGG GTGTTGCCGC GGGCCGGCTC GCCGGCGCGC
GGGCTGCTAG ACAACTGCTT CGCCGCCGCT GGCCTGCCAG CGCCGTGGCC GGTGGTGGAA
AGCGCTGATC TGGCGGTTAT CCGTGGCCTG CTGGTGCGTT CAGACATGCT GGCGGCGGTG
TCTGCGCACC AGTTGGCGTA CGAGATTGCC AGCGGCGAGC TGCAACGCCT GCCGCTGGTA
CTGCCCGGTA CTGCCCGCGC CATCGGCCTC ATGCAGCGCA GTGGCTGCCT GCAGTCACCG
GCGGCGGTCG CGCTGATGGC CTGTATCCGC CAGGTGATCA CCGAGCATGC CTGA
|
|---|
| Protein sequence | MIDVELPNLM QVRAFIRVAE LGSVSRATQV LFRAQSVVTR AIAELEARFA VPLFERHANG
MRLTDYGECL LPRAQRVLAE LDGVPGLMGT AQGEPLYLFQ ARRLQVFVKL CETRHMQTVA
RHFGLSQPAV SAALKVLEGG CGQPLFVRTS RGLQPTVASR DILFPIRRAL NELRHLDSDL
SAMQGTLRGV VHVGALPLGR SRILPEAILR FTAQHLQVRV VTNESPFDLL ATELRVGDVD
FVLGALRPHD YASDLVGEPL INEEMVLLAR RGHPLLHTPL TLKGVHQARW VLPRAGSPAR
GLLDNCFAAA GLPAPWPVVE SADLAVIRGL LVRSDMLAAV SAHQLAYEIA SGELQRLPLV
LPGTARAIGL MQRSGCLQSP AAVALMACIR QVITEHA
|
|---|
| |