Gene PputW619_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2018 
Symbol 
ID6110971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2249214 
End bp2250053 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID641621813 
Productalpha/beta hydrolase fold 
Protein accessionYP_001748887 
Protein GI170721199 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.800394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATA ACCATCTCAC CGTTCCGACC CGCACAGTTG AAGTAGGCGG CGACACGTTC 
ACCTACCGCC GCTGGGGCAA CCCTTCTGGT GTGCCGCTGG TCTTCATCGC CCATTTCCGT
GGCGGGCTCG ACCACTGGGA TCCGATCATC ACTGATGGTC TGGCGGCGGG GCGCGAAGTG
ATCCTGCTGA ACGGTAGAGG TGTGGCTTCA TCGTCGGGCA CTCCGGCCAT CACCATTGAG
CAAATGGCGG ATGACATTGC AGCAGCCATC AAGGCCCTGG GGCTGACCCA GGTCGACCTG
CTCGGCTTCT CCATCGGTGG CTTGCAGGTT CAGGAAGTGG CACTGCGTCA CCCTGCGTTG
GTGCGCAAGC TGGTGCTGCT CGGCACCGGT CTGCGCGGTG GTGATCCGAG CATGGCAGAG
GGTGTGAGAG AAGCCGCTTC GAACCCCGTC CCCACCATCG AGAACTTCCT GTTCCTCTTC
TTCGGTCGCT CGGAAGCTGC CAGGAAAGCG GGCCTGGCGT TCTGGGAACG CCGCAACCAG
CGTGTCGATC AGGACACCCC AAGCTCGGTT GAGGTCGCAA TGGCTCAGGG CGCTGCATTT
GCAGCCTATG TCCAGTCGGC ACAGGGTGAG AACCGCTTCG CTTACCTCAA CGAAATCAAG
CAGCCTACCT TGGTGGTCAA TGGCGTCGAC GACGTCATGA TTCCTTCGAT CAATTCGTGG
CACCTGGTAC AGAACATTCC AGATGCCCAG TTGCTGATTT ACCCCGACTC CGGTCACGCC
GCGCACTTCC AGTTCCCTGA GCGCTTCCTG AAACACGCCC TTCAGTTCCT GGAAGAGTAA
 
Protein sequence
MSHNHLTVPT RTVEVGGDTF TYRRWGNPSG VPLVFIAHFR GGLDHWDPII TDGLAAGREV 
ILLNGRGVAS SSGTPAITIE QMADDIAAAI KALGLTQVDL LGFSIGGLQV QEVALRHPAL
VRKLVLLGTG LRGGDPSMAE GVREAASNPV PTIENFLFLF FGRSEAARKA GLAFWERRNQ
RVDQDTPSSV EVAMAQGAAF AAYVQSAQGE NRFAYLNEIK QPTLVVNGVD DVMIPSINSW
HLVQNIPDAQ LLIYPDSGHA AHFQFPERFL KHALQFLEE