Gene PputW619_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2017 
Symbol 
ID6110970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2248530 
End bp2249084 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content58% 
IMG OID641621812 
ProductTetR family transcriptional regulator 
Protein accessionYP_001748886 
Protein GI170721198 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.93886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCA CAAAGGCCCA GGCACAAGCT AACCGAGCGC ATATCGTGGA AACGTCTTCC 
AGGCTATTTC GCGAGCGCGG CTATGACGGC GTCGGTGTTG CAGACCTCAT GGCTGCCGCC
GGCTTCACCC ATGGCGGGTT TTACAAGCAC TTCAAGTCCA AGGCAGATTT GATGGGCGAA
GCAGCCACTT GCGGGCTCAA CAAGACGGTC GAGCAGATGC AGGGCATCCA GCTGGCCGAC
TTCGTCAATT TCTACCTGTC CCGCGAGCAC CGCGATGAGA AAGGCAATGG CTGCACGCTA
GCGGCGCTGG GCGCAGACGC TGCACGCCAG CCCAATGAGA TCAAAGCTGC TTATGGCGCT
GGGATCGAAG AATTGCTGGA GGTTTTACAA GGCAAAAATG AAGAGCCTGG CCCAAGCCGT
GCTGAAATCA TCGATACCTT CGCACATGCC CTCGGCGCCT TGGTTCTGTC TCGCGCCTGC
CCGGAAGACT CTCCACTGGC TGATGAAGTG CTCAGCGTTT GTCGTGAGAA GATCCTGGGC
AAGCTGAGGT CCTGA
 
Protein sequence
MKVTKAQAQA NRAHIVETSS RLFRERGYDG VGVADLMAAA GFTHGGFYKH FKSKADLMGE 
AATCGLNKTV EQMQGIQLAD FVNFYLSREH RDEKGNGCTL AALGADAARQ PNEIKAAYGA
GIEELLEVLQ GKNEEPGPSR AEIIDTFAHA LGALVLSRAC PEDSPLADEV LSVCREKILG
KLRS