| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1995 |
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| Symbol | |
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| ID | 6110948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2224963 |
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| End bp | 2226696 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621790 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001748864 |
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| Protein GI | 170721176 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.308211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.747676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATA ACAAACGCCC CCTGCGCTCC GCCCAATGGT TTGGTACCGC CGACAAGAAC
GGCTTCATGT ACCGCAGCTG GATGAAGAAC CAAGGCATCC CCGACCACGA ATTCCAGGGC
AAGCCGATCA TCGGCATCTG CAACACCTGG TCGGAGCTGA CCCCGTGCAA CGCCCACTTC
CGCAAGATTG CCGAGCACGT CAAAAAAGGC GTGCTGGAGG CCGGTGGCTT CCCGGTGGAG
TTCCCGGTGT TTTCCAGCGG TGAGTCCAAC CTGCGCCCTA CCGCCATGCT CACCCGCAAC
CTGGCGAGCA TGGATGTGGA AGAAGCGATC CGTGGCAACC CGGTGGACGC CGTGGTGCTG
CTGACCGGCT GCGACAAGAC CACCCCGGCG CTGCTGATGG GCGCCGCCAG CTGCGACGTG
CCGGCGATCG TGGTCACTGG TGGGCCGATG CTCAACGGCA AGCACAAAGG CAAGGACATT
GGCGCCGGCA CCATCGTCTG GCAGATGCAC GAGGCCTATA AGGCCGGCCA GATCGACCTC
AACGAGTTCC TCTCGGCCGA GGCCGGCATG TCGCGCTCGG CGGGTACCTG CAACACCATG
GGCACCGCGT CGACCATGGC CTGCATGGCC GAAGCGCTGG GCACCTCGCT GCCGCACAAC
GCCGCCATCC CGGCGGTGGA TGCCCGCCGC TACGTACTCG CCCACCTGTC GGGCATGCGC
ATTGTCGACA TGGTGCGCGA AGACCTGCGC CTGTCGAAGA TCCTTACCCG CGAAGCCTTC
GAGAACGCCA TCCGCGTCAA CGCCGCCATC GGTGGTTCGA CCAACGCCGT GATCCACCTC
AAGGCGATTG CCGGGCGCAT TGGTGTAGAC CTGCAACTGG AAGACTGGAC CCGCGTCGGC
CGCGGCACAC CGACCTTGGT CGACTTGCAG CCATCGGGCC GCTTCCTGAT GGAAGAGTTC
TACTACGCCG GCGGCCTGCC CGCAGTCATC CGCCGCCTGG GCGAGCATGG CCTGCTGCCC
AACCCCACCG CACTGACCGC CAACGGCAAG AGCCTGTGGG ACAACTGCCA GGCCGCGCCG
CTGTATGACG AAGAAGTCAT CCGCCCGCTT GATAAACCGC TGGTGGCCGA TGGCGGCATC
TGCATCCTGC GCGGCAACCT GGCACCCAAA GGCGCAGTGC TAAAGCCGTC GGCGGCCACC
CCAGCGCTGA TGCAGCACCG CGGCCGGGCC GTAGTGTTCG AAAACTTCGA GGACTACAAA
GCGCGCATCA ACGACCCTGA GCTGGACGTG GACGCCAATT CGGTGCTGGT GATGAAATAC
TGCGGGCCCA AGGGCTACCC GGGCATGGCC GAGGTCGGCA ACATGGGCCT GCCCGCCAAG
CTGCTGGCCC AGGGCGTGAC CGACATGGTG CGCATCTCCG ATGCCCGCAT GAGCGGTACT
GCCTACGGCA CCGTAGTGCT GCACGTGGCA CCCGAGGCTG CTGCGGGCGG CCCATTGGCA
GCCGTGCGCG AAGGTGACTG GATCGAGCTG GACTGCAAGG AAGGCCGGCT GCACCTGGAC
ATTTCTGCCG AGGAACTGGC TGGCCGCCTG GCCGACCTGC AAGCACCGCC ACAGTTGATC
AGTGGCGGTT ATGCGAAGCT GTATCTGGAC CATGTGATGC AGGCTGACGA AGGTTGCGAT
TTCGACTTCC TGGTTGGCTG CCGTGGCGCG GCGGTGCCCA AGCATTCGCA CTAA
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| Protein sequence | MSDNKRPLRS AQWFGTADKN GFMYRSWMKN QGIPDHEFQG KPIIGICNTW SELTPCNAHF
RKIAEHVKKG VLEAGGFPVE FPVFSSGESN LRPTAMLTRN LASMDVEEAI RGNPVDAVVL
LTGCDKTTPA LLMGAASCDV PAIVVTGGPM LNGKHKGKDI GAGTIVWQMH EAYKAGQIDL
NEFLSAEAGM SRSAGTCNTM GTASTMACMA EALGTSLPHN AAIPAVDARR YVLAHLSGMR
IVDMVREDLR LSKILTREAF ENAIRVNAAI GGSTNAVIHL KAIAGRIGVD LQLEDWTRVG
RGTPTLVDLQ PSGRFLMEEF YYAGGLPAVI RRLGEHGLLP NPTALTANGK SLWDNCQAAP
LYDEEVIRPL DKPLVADGGI CILRGNLAPK GAVLKPSAAT PALMQHRGRA VVFENFEDYK
ARINDPELDV DANSVLVMKY CGPKGYPGMA EVGNMGLPAK LLAQGVTDMV RISDARMSGT
AYGTVVLHVA PEAAAGGPLA AVREGDWIEL DCKEGRLHLD ISAEELAGRL ADLQAPPQLI
SGGYAKLYLD HVMQADEGCD FDFLVGCRGA AVPKHSH
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