| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1989 |
|---|
| Symbol | |
|---|
| ID | 6110942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2218142 |
|---|
| End bp | 2218981 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641621785 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_001748859 |
|---|
| Protein GI | 170721171 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.797447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTTT ATCTGCAATT CGAACAGGTA GATGTATTTG CCGAGCGTCC CCACGAGGGT
AATGCGCTGG CCGTGGTAGT GGGGGCCGAC GAGCTGACAG CCGAGCAGAT GCAGGCTTTC
GCTCGCTGGA CGCAACTCAG TGAAACCACT TTTCTGCTAA GACCTGAAGC GCCCGAGGCG
CATTATCGCG TACGCATTTT TACCCCGCTA CGGGAGTTAC CCTTCGCCGG GCACCCTACA
CTAGGAAGTT GCGAGGTATG GTTGAAACAG CAAGGTAACC GCGAGAACGT TGAGATCATT
CAAGAGTGTT CGGCTGGCTT GATTCGTGTG CTCAAGCAGG GGCGGTATTT GGCTTTCTCT
GCTCCCCCAC TGCTGCGCAG CGGCCCGTTG GACGCCAAGA CGCTGAATCA GATCGAGCAG
GGGCTCGGTC TTGCTGCGGG ACAGATCTTG GCTAGCCAAT GGGTGGACAA TGGTCCTGGC
TGGGCGGGAG TGTTGCTGGC GGGTCGTGAT CAGGTCCTGG CGATCAAACC CGATTACGCC
GCACTGCAGG GGTTGAATGT CGGCGTCATT GCGCCTTGGG CAGGTCCCGA GGCTGAAGCA
GATGTGGAGG TCAGAACTTT TATGGGGGAG GAATGCAACG AGGATCCGGT CACGGGAAGC
CTCAATGCAG GCCTGGCTCA GTGGTTGATC GGAGCAGGCA TCCTTCGTGA TCGGTACACG
GTCAGCCAGG GCACGGTTAT GGGGCGTCGC GGTCGGTTAC AGATCGAATG CATCAACGGA
ACGATCTGGG TGGGTGGGGA GGTGCAGCAC TGTATTTCGG GAAGGGCTGT CTTCTGCTGA
|
|---|
| Protein sequence | MPFYLQFEQV DVFAERPHEG NALAVVVGAD ELTAEQMQAF ARWTQLSETT FLLRPEAPEA
HYRVRIFTPL RELPFAGHPT LGSCEVWLKQ QGNRENVEII QECSAGLIRV LKQGRYLAFS
APPLLRSGPL DAKTLNQIEQ GLGLAAGQIL ASQWVDNGPG WAGVLLAGRD QVLAIKPDYA
ALQGLNVGVI APWAGPEAEA DVEVRTFMGE ECNEDPVTGS LNAGLAQWLI GAGILRDRYT
VSQGTVMGRR GRLQIECING TIWVGGEVQH CISGRAVFC
|
|---|
| |