| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1970 |
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| Symbol | rplT |
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| ID | 6110923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2196667 |
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| End bp | 2197023 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641621767 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001748842 |
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| Protein GI | 170721154 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0648376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00701004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCGTG TAAAGCGCGG CGTTATCGCT CGTAAGCGTC ACAAAAAAAT TCTGAAACTG
GCTAAAGGTT ACTACGGTGC ACGCTCGCGC GTATTCCGCG TAGCCAAGCA GGCAGTCATC
AAGGCAGGCC AATACGCCTA CCGCGACCGT CGCCAGAAGA AGCGTCAGTT CCGCGCACTG
TGGATCGCTC GTATCAACGC CGGTGCCCGC ACCAACGGTC TGTCTTACAG CCGTCTGATT
GCTGGCCTGA AAAAGGCGTC GATCGAAATC GACCGTAAGG TTCTGGCTGA CCTGGCAGTG
AACGAAAAAG CGGCGTTTGC TGCAATTGTC GAGAAAGCTA AAGCCGTTCT GGCTTAA
|
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| Protein sequence | MARVKRGVIA RKRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQKKRQFRAL
WIARINAGAR TNGLSYSRLI AGLKKASIEI DRKVLADLAV NEKAAFAAIV EKAKAVLA
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