| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1952 |
|---|
| Symbol | |
|---|
| ID | 6110905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2182115 |
|---|
| End bp | 2182552 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641621749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001748824 |
|---|
| Protein GI | 170721136 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4875] Uncharacterized protein conserved in bacteria with a cystatin-like fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00297466 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCAG CAACTACCTC GCCCGCCAGC ACAGCCCCCT ATGCCGACAT CGAGATGGCC
TGCCTGGCTG GGGCCAAAGC GGCGCTCTAT CACTGGGCGG CCACTGTGGC CACCCGTGAC
GTCGATAAGA TTCTGGCGCT TTACGCCTCG GACGCCATCT TGGTGCCCAC CCTGTCCAAC
CAGGTGCGCG ATTGCAACGA CAGCCGCCGT AATTACTTCG AGAATTTTCT GGCCAACGAT
GGCCTGGTGT GTGACATCGA GGTTTTCAAA AAACGCGTCA GCCGCAAGCT CGGCACCGTG
GTCATCGGTG GCTTGTACAC CTTTGCCTTG CGCGAAGGCG ATGCTCAGCG CGTGGTACCA
GCGCGCTTTC TGTTCACATT CGAGAACATC GATGAACAGT GGCTGATCAC TGGCCATCAC
TCGTCCATCG AAGCTTGA
|
|---|
| Protein sequence | MSPATTSPAS TAPYADIEMA CLAGAKAALY HWAATVATRD VDKILALYAS DAILVPTLSN
QVRDCNDSRR NYFENFLAND GLVCDIEVFK KRVSRKLGTV VIGGLYTFAL REGDAQRVVP
ARFLFTFENI DEQWLITGHH SSIEA
|
|---|
| |