| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1945 |
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| Symbol | |
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| ID | 6110896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2175498 |
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| End bp | 2176376 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621740 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001748817 |
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| Protein GI | 170721129 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.140047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000477729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCTT CACTCCCCGG CGTCCCGCTG TTTCAGTTGT ATGGCGAAAA CCAGGCATGG
CCCGGTACGG ACTTGCTGCA TTGCGAGTCG ATCCCCGCCC GTAGCCGCCT GCACCACTGG
GAAATCAAAC CGCACCAACA CGCCGAGCTT TTTCAGTTGC TGTATGTGCA ACGTGGCCAG
GCTCAGGTAG AGATCGAGGG CGTGCGCAGC GCCATTGGCG AAGCGGCAAT CCAGGTGGTA
CCACCGCTGA CCGTGCACGG TTTTCGCTTC AGTGCCGATA TCCAGGGGCA TGTGCTGACC
TTCGGCACCG CCCTGGTCGC CAACCTTGAG CAGCGCCTGG GTGCACCGCT GGGGGTGCTG
GCCAAGCCTG CCTGTTACCC GTTGGGCAAG GACCGTGTGC CTCTGCGCAG CCTGATCGAC
ACGCTGCAGC AGGAGTACCA AGGCCATGCC CCGGCACGCG CGCCCCTGCT CGAAGCCCTG
GTGACCGCGC TGATGGTGTG GATCAGCCGT CGCCAGCAAC TGGGCCAGGC GCCACGCAAC
CGCGACGAAC GTGACCGCCA GTTGCTGGGG CAATACCTGC GCCTGGTCGA AGCGCACTAC
CGTGAGCACC TGTCGGTGGA GGACTTTGCC GCGCGGTTGA AAATCCCGAG CCTGCAGCTC
AACCAGCTGT GCCGGGCATT GAGCGGGCAG ACCGCACTGC AACTGGTGCA CCAGCGGCTG
CTGCTGGAGG CACAACGAAA CCTGATCTAC ACACGCATGA GCATCGGGCA GTTGTCGGAC
AGCCTGGGGT TCAGTGATCC GACCTACTTT GCACGGTTCT TCAAGCGCCT GAGTGGGCAA
ACACCCAATG GTTATCGTCG CTCAGTGCAG CCTGATTGA
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| Protein sequence | MKSSLPGVPL FQLYGENQAW PGTDLLHCES IPARSRLHHW EIKPHQHAEL FQLLYVQRGQ
AQVEIEGVRS AIGEAAIQVV PPLTVHGFRF SADIQGHVLT FGTALVANLE QRLGAPLGVL
AKPACYPLGK DRVPLRSLID TLQQEYQGHA PARAPLLEAL VTALMVWISR RQQLGQAPRN
RDERDRQLLG QYLRLVEAHY REHLSVEDFA ARLKIPSLQL NQLCRALSGQ TALQLVHQRL
LLEAQRNLIY TRMSIGQLSD SLGFSDPTYF ARFFKRLSGQ TPNGYRRSVQ PD
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