Gene PputW619_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1944 
Symbol 
ID6110895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2174989 
End bp2175387 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID641621739 
ProductMerR family transcriptional regulator 
Protein accessionYP_001748816 
Protein GI170721128 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0920422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000346668 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCC AGACCTACAG CATCTCCGAC CTGTCCCGCG AGCTGGACAT CACCACCCGC 
GCCATCCGTT TCTATGAGGA ACAGGGCCTG CTCAGCCCGG AGCGCCGTGG CCTGGAGCGC
ATCTATTCGG CACGCGACAA GGTCAGCCTG AAGCTGATAC TGCGTGGCAA GCGCATCGGT
TTCTCGCTCG CCGAATGCCG TGAACTGATC GAGCTCTACG ACCCCAGCAG CGGCAACCTC
AAGCAACTCA ACAGCATGCT GGCAAAAATC ACCGAGCGCC GCGCCCAGCT TGAGCAGCAG
ATGCTCGACA TCCACCAGAT GCAACTGGAG CTGGACACCG CCCAGGAACG TTGTGAACAG
GCCCTGGCCG CAACGTTGAA CAATAACGAC AACCGTTGA
 
Protein sequence
MSTQTYSISD LSRELDITTR AIRFYEEQGL LSPERRGLER IYSARDKVSL KLILRGKRIG 
FSLAECRELI ELYDPSSGNL KQLNSMLAKI TERRAQLEQQ MLDIHQMQLE LDTAQERCEQ
ALAATLNNND NR