| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1942 |
|---|
| Symbol | |
|---|
| ID | 6110893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2173019 |
|---|
| End bp | 2173537 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641621737 |
|---|
| Product | MgtC/SapB transporter |
|---|
| Protein accession | YP_001748814 |
|---|
| Protein GI | 170721126 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1285] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.968132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00172297 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCA TCTGGCAAAC CATTCAAGCA GAATTCGCCG ACATCACCGA AGTGCGCGAA
GTCACCCGTA TCATCCTGCG CTTGCTGATG GCAGCCATTC TGGGTGCCAT TCTGGGCTTC
GAGCGTGAGC ACAAAGGCAA GTCCGCTGGT GTGCGTACAC ATATGCTGGT GTCGATGGGC
GCCGCATTAT TCGTGCTGGC GCCAAGCATG GCCGGTGCCG ACGAGCAGGC CTTGAGCCGG
GTGATCCAGG GTATCGTCGC CGGTATCGGT TTTCTCGGTG CCGGCACCAT CCTCAAAGGT
AATGGCCGCG ATACCAGTCA CGTCAAAGGC CTGACCACGG CCGCCGGCCT GTGGATGACG
GCCGCAATCG GTACCGCTGC AGGCATGGGG CGTGAGGCGA CGGCGCTGAT CAGCACAGTG
CTTGCGCTGC TGGTGCTGGC CACGATGCCG ATAGTGGTGG AGAAGGTCGA GGGGCAGGAC
GAGGAGAAAC AGCAGGAGGA GGAGGGCAGG AAGCACTGA
|
|---|
| Protein sequence | MDLIWQTIQA EFADITEVRE VTRIILRLLM AAILGAILGF EREHKGKSAG VRTHMLVSMG
AALFVLAPSM AGADEQALSR VIQGIVAGIG FLGAGTILKG NGRDTSHVKG LTTAAGLWMT
AAIGTAAGMG REATALISTV LALLVLATMP IVVEKVEGQD EEKQQEEEGR KH
|
|---|
| |