| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1939 |
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| Symbol | |
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| ID | 6110890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2168877 |
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| End bp | 2170952 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641621734 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001748811 |
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| Protein GI | 170721123 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0201512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTGA ACGAGATGCT CGCCCTGCGT GAAGAAATCG CTACCCTGCG CCAACGTAAC
GCGCAGCTTG AAACCGAACT GCAGCAACAG CCGCATCCGG GCCTCGATGT CTACCGCTTT
CTGTTCGACA CCATGGACGA AGGCTTTTGC ATCATCGAAT TCATTGACGG CCCGCATGGC
CCGCTGAGTG ATTACGTGCA CGTGCTCGTC AACCCCGCCT ACGCCAGGCA TGCCGGCATC
GCTGACGTCA CCGGCCAGAA AATGCGCGAA ATATTGCCTG ATGAAGCCGA CGCTTGGGTT
GCCCGTTACG GTCCAGTGCT GCATACCGGC GCCCCGCTGC AATTCGAACA GGAACTGCGA
GCCAGCGGCC GCATATTGTC AGTAAGTACC TTTCGCATCG AGCCGCCGCA GCGCCGGCAG
CTTGCGGTTC TGTTCAAGGA TGTTACCGAG CGGCGCAACA CCGAGCAGGC CCTTGAGCAG
CTCAATGCGC ACCTGGAGCA AAGGGTCAAC GAAGCCTTGG CACAGCGCAG CCTGTTCGCA
GAGCTTATCG ACCAGAGCGC AGCCAACGTG CATGTGCTCG ATAACGGCAT GCACTGGCTG
GCCGTCAATC GCAAGGCCAG GGAAGACTTC CGGTTCCTGT ATGGCCAGAC ACCGGAAGTC
GGTGCCCTCA TGCCGCCCCT GATGGGTGAC AATGCCGCTG ACCGGAATGC GATCCTGCCC
TTGTGGCGAC GGGCACTGCA GGGCGAGCAG TTCACCGCGA TCGGTGCATT CGGCCAGCAA
CCAGACCAGC GCCATTATGA ACTGCGCTTC AATGCCCTGC GTGATGCTGC AGGTACGCCG
GTGGGCGCCT ACCTGTTCGC CTACGACATC AGCGAACGGG TACAGGAGCA ACAACGCCTT
GCCAAGGCAG AGCAGGCCCT GCGTCAGGCG CAAAAAATGG AGGCTATCGG GCAGCTTAGC
GGCGGCATCG CACATGACTT CAACAATTTG CTGGGCAGCA TCCTTAATAC CCAGGAACTA
CTCCAGCTGC GCCTGCAGCA ACAGCGCTAT AACGAGCTGG AAAAGTTACT CGAATTGTCC
AACAGCATGG CCAAACGCGC CTCATCGCTG GTGCAACGAC TGCTGGCATT CTCGCGCCAG
CAAACCCTGC AACCACGCGC CACAGAGGTG GCGGTGTTGC TGGGCGACAT CGAGGAGCTG
GTGCGCCGCA CCATCGGGCC ATCCATTTCC TTGCACAGCC GGTTCGCCCC TGAACTATGG
CCAACCTTCA TCGACCCGCC ACAATTGGAA AGCGCACTGC TCAACTTGTG CATCAATGCA
CGTGACGCGC TGCCTGGCGG GGGTGTCATC AGCATACATG GCGACAATGT GGCCCTCGAC
AGCGATCAGG CACGCCCTTT GGGGTTGCCC TGCGGCGACT ACGTGCGCAT TAGCGTTGTC
GACAACGGAT GCGGTATGAG CGAGGAAGTG GTTGCACGCG CCTTCGATCC TTTCTTCTCC
ACCAAACCTA TCGGCCGGGG CACCGGTCTC GGGCTGTCGA TGACCTACGG TTTCGTGCGC
CAGTCCGGTG GGCAGTCACG TCTGCTTTCT CAACCAGGCA AGGGCACACG CGTTGAACTG
TACCTGCCGC GCCATCACGA ACAACCCACG CGGCAGGCGC AGGCTCCCAA GACCAGCTCA
CTGGATAAAC ACCGTGCCGG CGGGCAGCGC ATCGTGCTGG TGGAAGACCA GCCAGCCCTG
CGCCTGGTGA TCAGCGAGGT ACTGCAAGAG CAGGGTTACC TGGTCGAAGC CTTCGAGACT
GGTGCTGCCG CCCTGGCACA CTTGCAACGT AGCGAACCGC CGGACCTGCT GCTAAGCGAC
ATCGGCCTGC CCGAAGGCCC CAACGGTCGC CAGGTGGCCG AGCGTTACCG CCAACAGTAC
CCCAACCTTA AAGTGCTGTT CATCACCGGC TATGACAACA GTGCGGCGCT GGGAGACGGC
CAACTGCTCC AAGGCGCCCA TGTGCTGGGC AAGCCGTTCG AGCTGGACGT GCTGGCCGAG
TGTGTGCATC AGCTGCTGGA GGCCAGGCAG CCCTGA
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| Protein sequence | MPLNEMLALR EEIATLRQRN AQLETELQQQ PHPGLDVYRF LFDTMDEGFC IIEFIDGPHG
PLSDYVHVLV NPAYARHAGI ADVTGQKMRE ILPDEADAWV ARYGPVLHTG APLQFEQELR
ASGRILSVST FRIEPPQRRQ LAVLFKDVTE RRNTEQALEQ LNAHLEQRVN EALAQRSLFA
ELIDQSAANV HVLDNGMHWL AVNRKAREDF RFLYGQTPEV GALMPPLMGD NAADRNAILP
LWRRALQGEQ FTAIGAFGQQ PDQRHYELRF NALRDAAGTP VGAYLFAYDI SERVQEQQRL
AKAEQALRQA QKMEAIGQLS GGIAHDFNNL LGSILNTQEL LQLRLQQQRY NELEKLLELS
NSMAKRASSL VQRLLAFSRQ QTLQPRATEV AVLLGDIEEL VRRTIGPSIS LHSRFAPELW
PTFIDPPQLE SALLNLCINA RDALPGGGVI SIHGDNVALD SDQARPLGLP CGDYVRISVV
DNGCGMSEEV VARAFDPFFS TKPIGRGTGL GLSMTYGFVR QSGGQSRLLS QPGKGTRVEL
YLPRHHEQPT RQAQAPKTSS LDKHRAGGQR IVLVEDQPAL RLVISEVLQE QGYLVEAFET
GAAALAHLQR SEPPDLLLSD IGLPEGPNGR QVAERYRQQY PNLKVLFITG YDNSAALGDG
QLLQGAHVLG KPFELDVLAE CVHQLLEARQ P
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