| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1938 |
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| Symbol | |
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| ID | 6110889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2168120 |
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| End bp | 2168866 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641621733 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001748810 |
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| Protein GI | 170721122 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0371739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAG TCATTGTCAT CACCGGCGCC AGCCGTGGCA TCGGCGCCGC CACCGCTATG
CAGGCGGCCC GCGAGGGTTA CCGCATCTGC ATCAACTACC ACGCCGATGA CCAGGCCGCG
CAAGGCATTC TTGACCAGGT TCGCGCGCTC GGCGCCCAGG CCATCTGTGT GCGCGCAGAC
GCCAGTGTCG AGGACGAGGT GATCCAGCTG TTCCACCGCG TCGATGAAGA GCTCGGCCCC
GTCACCGCAC TGGTGAACAA CGCGGGCACC ATCGGCCAGC AAAGCCGTGT CGAAGACATG
TCGGAGTTCC GCCTGCTCAA GGTGATGAAA ACCAATATCG TCGGGCCGAT GCTTTGCGCC
AAGCACGCCT TGCTGCGCAT GGCCCGCCGC CACGGCGGCG AAGGCGGGGC CATCGTCAAT
GTGTCATCGG TCGCTGCGCG CCTGGGGTCA CCCAACGAAT ACGTCGACTA CGCCGCCTCC
AAAGGCGCCC TCGATACCTT CACCATCGGC TTGGCCAAGG AAGTGGCAGG TGAGGGGGTG
CGGGTCAATG GCGTGCGCCC AGGCTACATT CATACCGCCT TCCACGACCT GTCCGGCGAC
CCCGACCGTG TCGCCAAGCT GGAGCCTGGC TTGCCCATGG GGCGTGGCGG CCGCCCGGAA
GAAGTGGCCG AGGCGATTCT CTGGCTGCTG TCGGACAAGG CGTCCTATTC CACTGGCAGT
TTCCTCGACC TGGGCGGCGG GCGCTGA
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| Protein sequence | MEKVIVITGA SRGIGAATAM QAAREGYRIC INYHADDQAA QGILDQVRAL GAQAICVRAD
ASVEDEVIQL FHRVDEELGP VTALVNNAGT IGQQSRVEDM SEFRLLKVMK TNIVGPMLCA
KHALLRMARR HGGEGGAIVN VSSVAARLGS PNEYVDYAAS KGALDTFTIG LAKEVAGEGV
RVNGVRPGYI HTAFHDLSGD PDRVAKLEPG LPMGRGGRPE EVAEAILWLL SDKASYSTGS
FLDLGGGR
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