Gene PputW619_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1936 
Symbol 
ID6110887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand- 
Start bp2166532 
End bp2167647 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content65% 
IMG OID641621731 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 
Protein accessionYP_001748808 
Protein GI170721120 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0160251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCA ACACGATCGA AGAACTCCTC GAGGACTACC GCCAAGGCAA GATGGTGCTG 
CTGGTGGACG ACGAGGATCG GGAAAACGAA GGCGACCTAC TGATCGCCGC CGAGCGCTGT 
GACGCCCAGG CCATCAACTT CATGGCCCGC GAAGCGCGGG GCCTGATCTG CCTGACCCTG 
ACCGACGAGC ATTGTCAGCG CTTGGGGCTG GAGCAGATGG TACCGGCCAA TGGCAGTGCG 
TTCAGCACCG CCTTCACCGT ATCGATCGAG GCCGCTACGG GGGTTACCAC GGGTATTTCT 
GCGGCCGACC GGGCACGCAC CGTGGCTGCA GCCATGGCCG CCGATGCCCG CCCGGAGGAT 
CTGGTGCAGC CCGGCCACAT TTTCCCGCTA CGCGCCCGCG AAGGCGGTGT GCTGAACCGC 
GCCGGCCATA CCGAAGCGGG TTGCGACCTG GCACGCCTGG CCGGTTTTGC CCCGGCGTCG 
GTGATCGTCG AGGTGCTCAA CGACGACGGG ACCATGGCCC GTCGACCGGA CCTGGAAGTG 
TTCGCCGCCC GCCACGGCAT CAAGATCGGC ACCATCGCCG ACCTGATCCA CTACCGCCTG 
AGCACCGAGC AGACCATCAA GCGCATCGGC GAACGCGAAC TGCCGACCGT ACACGGCACC 
TTCCGCCTGG TCACCTATGA AGACCGTATC GAAGGCGGTG TGCACATGGC CATGGTGATG 
GGCGATATCC GCCGCGAACA GCCGACCTTG GTGCGCGTGC ATGTGATCGA CCCGCTGCGC 
GACCTGGTCG GTGCCGAATA CGCCGGGCCG GCCAACTGGA CCTTGTGGGC TGCGCTGCAG 
AAGGTCGCTG AGGAAGGTAG CGGGGTGGTG GTGATTCTGG CCAACCATGA ATCCTCCCAG 
GCGCTGCTTG AACGCATCCC GCAACTGACC CAGCCGTTGC GGCCCTACCA GCGCGGCCAA 
TCGAAGGTGT ACTCGGAAGT CGGTACCGGC GCGCAGATTC TCCAAGACCT GGGTGTTGGC 
AAGCTGCGCC ACCTGGGCCC GCCCCTCAAG TATGCGGGGT TGGCGGGGTA TGAGCTGGAA 
GTGGTGCAGA GCATACCCTT CGAGCCCCAG GGCTGA
 
Protein sequence
MAFNTIEELL EDYRQGKMVL LVDDEDRENE GDLLIAAERC DAQAINFMAR EARGLICLTL 
TDEHCQRLGL EQMVPANGSA FSTAFTVSIE AATGVTTGIS AADRARTVAA AMAADARPED 
LVQPGHIFPL RAREGGVLNR AGHTEAGCDL ARLAGFAPAS VIVEVLNDDG TMARRPDLEV 
FAARHGIKIG TIADLIHYRL STEQTIKRIG ERELPTVHGT FRLVTYEDRI EGGVHMAMVM 
GDIRREQPTL VRVHVIDPLR DLVGAEYAGP ANWTLWAALQ KVAEEGSGVV VILANHESSQ 
ALLERIPQLT QPLRPYQRGQ SKVYSEVGTG AQILQDLGVG KLRHLGPPLK YAGLAGYELE 
VVQSIPFEPQ G