| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1935 |
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| Symbol | |
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| ID | 6110886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2165217 |
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| End bp | 2166242 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641621730 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001748807 |
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| Protein GI | 170721119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0092499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGTTGA GCAAACGTGT AACCGCAGTG CTGTCCGCCA GCCTGCTGAC CCTGGCATGT
CAGGCCACCC AGGCCGCTGA CAGCCTCAAC TTCGTCAGCT GGGGCGGTAC CACCCAGGAC
GCCCAGAAAG AAGCATGGGC CGTACCTTTC AGCAAATCGA CCAACATCAA AGTGGTGCAG
GACGGCCCGA CCGACTACGG CAAGCTCAAG GCCATGGTCG AGAGCGGCAA CGTGCAGTGG
GACGTGGTCG ACGTGGAAGC CGATTTTGCC CTGCGTGCCG CCAGTGAAGG GCTGCTCGAA
CCCCTCGATT TCACCACCAT CGCGCGCGAC AAGATCGACC CACGCTTCGT CTCCGACCAT
GGCGTCGGTT CGTTCTTCTT CTCATTCGTG CTCGGCTATA ACGAAGGCAA GCTCGGCGCC
AACAAGCCGG TGGACTGGAC CGCTCTGTTC GACACCAAGA CCTACCCCGG CAAGCGCGCC
CTGTACAAGT GGCCGAGCCC CGGCGTACTG GAACTGGCCC TGCTGGCCGA CGGTGTGCCG
GCCGACAAGC TCTACCCGCT GGACCTGGAC CGCGCCTTCA AGAAGCTCGA CACCATCAAG
AAAGACATCG TCTGGTGGGG CGGTGGTGCT CAGTCGCAGC AACTGCTGGC CTCCGGTGAA
GCCTCGCTCG GCCAGTTCTG GAACGGCCGC GTCTACGCCC TGCAGCAAGA TGGAGCGCCG
GTGGGCGTGA GCTGGAAACA GAACCTGGTC ATGGCCGATT TCCTGGTCAT CCCCAAGGGC
GCCAAGAACA AGGACGCGGC CATGAAGTTC CTGGCCCATG CCAGCAGCGC CGAAGGCCAG
GCCGAGTTCG CCAACAAGAC CGCCTACGCG CCGGTGAACC TGGACAGCGT GGCCAAACTC
GACAAAGACC TCGCGCAGAA CCTGCCGACC GCCTACGCCC AGGACCAGGT CACCCTGGAC
TTCGCCTACT GGGCCAAGAA CGGCCAGGCC ATCGCCGCGC GCTGGAATGA GTGGTTGGTG
AAATGA
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| Protein sequence | MLLSKRVTAV LSASLLTLAC QATQAADSLN FVSWGGTTQD AQKEAWAVPF SKSTNIKVVQ
DGPTDYGKLK AMVESGNVQW DVVDVEADFA LRAASEGLLE PLDFTTIARD KIDPRFVSDH
GVGSFFFSFV LGYNEGKLGA NKPVDWTALF DTKTYPGKRA LYKWPSPGVL ELALLADGVP
ADKLYPLDLD RAFKKLDTIK KDIVWWGGGA QSQQLLASGE ASLGQFWNGR VYALQQDGAP
VGVSWKQNLV MADFLVIPKG AKNKDAAMKF LAHASSAEGQ AEFANKTAYA PVNLDSVAKL
DKDLAQNLPT AYAQDQVTLD FAYWAKNGQA IAARWNEWLV K
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