| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1931 |
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| Symbol | |
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| ID | 6110882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2159827 |
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| End bp | 2161998 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621726 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001748803 |
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| Protein GI | 170721115 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0298623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCCA CCGGGATCCA TTCATTCCTG CAGCAGTGGA AAGACATGTC CCGTTTCTTC
AAGCTTCACC CTCTGGCAGC CTGCCTGGCC GTCGCCCTGC CGGCCCTGGC CGATGACCAC
GACAACCCTG CGGTGGCGCT GCCATCCACA GCCATCACCG ACACCCGCGC TGAGCAGAAG
GTCGACCTCG CCACGCCGAC CCAGGCCGGT TCACGCCTGA ACCTCAGCAC CCTGGAAACC
CCGGCCAGCA CCACGAGCAT CACCGCCGAA CAGATCCAGC AGCGCAACAA CCTCACCGTG
CAGGAGGCCG TGACCCGCTC GCCGGGCATC ACCTTCATCG GCAGCCCAGG CGATGGCGGC
ACCGGCCTTT CGGCGCGCGG CTTTACCGGG CACGGTTCAG TGATGACCCT GTTCGACGGC
GCACGCTTGT ATACCGGGGC CGGCACCCAG ACCTTTCCAG TCGACCCGTG GATGGTAGAG
CGCATCGATG TGATCCGGGG CCCGGCCTCG GTACTGTATG GTGAAGGCGC CACCGGCGCG
GTGATCAACG TCATCCCGAA AAAGCCGTTC ACCGGCGACA TTCACAACCA CCTGCGCCTT
GGCTATGGCT CCTGGGATCG CCAGCAACTG AGCCTGGACA GCGGTGGCAG CCTCAGCAAG
CGCCTGAGTT ACCGCCTGAC CCTTGACCAG CAGGCTGGCA ATGGCTGGGT CGACCGCACC
AACTCGCGCA GCCTTGCCCT GAGTGCCGCA CTGCAATTCG ATGCCACTGA CGACCTGAGC
TTTACCCTGG CCCACGAGCG CGGCGACGCC GAGCCCGCCA ATTACTACGG TACGCCGCTG
ATCGACGGCC ACTACCGCAG CAGCCTGCGC AAGAAGAACT ACAACATTCA GAATGACGTG
CAGCGCTACC ATGACGAATG GACCCGCTTC ACCACTGACT GGGCTATCAG TGACCAGCTC
AGTGCCAGCA ACCAGCTGTA CTACATCAAG AGCCGCCGGC ATTGGCGCAA TGCCGAGGAT
TACAGCTGGG ACGCCGACCG CCAACAGCTG CTGCGCCAGA GCTACCTGCA GATCAAGCAT
GATCAGGAGC AGATAGGCGA TCGCCAGACG TTCACCTTCG ACCATGCGTT GTTCGGGCTT
GCCAGCAGGA CGATGGTTGG CGCCGAGTAC AATAAGGTGC GCTTCAACGT TGACAGCAAC
TCGCCGTACA ACGATGTGGG CGGCGACTAC ATCGACCCGT GGCAACCAGC CCCGGGCTGG
TTCCACAGTG CTTCGCCCCT GCGACCGCAA ACCTTGTCCA CGACCCACAC CTTCGCTCTG
TTCGCCGAAA ACCGCCTGCA GCTGACCGAT CGCCTGTCGC TGGTGACCGG CGTGCGTCGC
GACCAGAACC ACATTGACCG CAACAACCTC ACCGACGGCA CGCGCAGCGA CCGTAGCCTG
CAAGGTGGCA ACTGGCGCGC AGGGCTGGTG TTCGCCGTCA GTGACGACCT ATCGCTGTAC
GGCCAGTACT CCACCAGCGA GGACGGGGTG AACGACCTGA TCAGCCTCAA TCCTGCGCAA
CTGAACTACG ACCTCACCGA GTCCAAGCAG ACCGAGCTGG GCCTGAAGCA GCGCTTCTGG
GAAGGCCGTG GTGAATGGAC GCTGGCGGCC TATCACATCG TCAAGAAAAA GCTGCTGGTG
GATGACCCTA TCACCCATGA AAAACAGCAG GCTGGGCAAC AAACCTCCGA TGGCCTGGAG
GCGAGCCTTG AGCTGGCCTT GCCGCAGCAG TGGCAGGTCT CAGCCAATGC GTCACTGGTG
CGCGCAAAGT ACGATGAGTT CGACGAAATG GTGGCTGGTG TAACACAGGA TCGCGCCGGC
AATCGCCCGT CCAACGTGCC ACGGCGTACT GCCAACCTGT GGCTGACCAA GGGCTTCGGT
CAGCAAGTGG AGGCCGGCAT TGGCGCACGG TACGTGGACG ACCGCTATGC CAATACGGCC
AACACTCAGC GTGCGCCGGG CTATACCGTG GTCGATGCCA ACATCGGCTG GCAGCTGTTG
CCGGATGTGC GCCTGGGGCT GCAGATAAAC AACCTGTTTG ACCGGGAATA TGTGGCTTCG
GCGTTCAGTG GCACGCAATG GATCATGGGC ACGCCGCGGT CGTATTTCGC GACAGTGGAT
CACAGCTTCT GA
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| Protein sequence | MFSTGIHSFL QQWKDMSRFF KLHPLAACLA VALPALADDH DNPAVALPST AITDTRAEQK
VDLATPTQAG SRLNLSTLET PASTTSITAE QIQQRNNLTV QEAVTRSPGI TFIGSPGDGG
TGLSARGFTG HGSVMTLFDG ARLYTGAGTQ TFPVDPWMVE RIDVIRGPAS VLYGEGATGA
VINVIPKKPF TGDIHNHLRL GYGSWDRQQL SLDSGGSLSK RLSYRLTLDQ QAGNGWVDRT
NSRSLALSAA LQFDATDDLS FTLAHERGDA EPANYYGTPL IDGHYRSSLR KKNYNIQNDV
QRYHDEWTRF TTDWAISDQL SASNQLYYIK SRRHWRNAED YSWDADRQQL LRQSYLQIKH
DQEQIGDRQT FTFDHALFGL ASRTMVGAEY NKVRFNVDSN SPYNDVGGDY IDPWQPAPGW
FHSASPLRPQ TLSTTHTFAL FAENRLQLTD RLSLVTGVRR DQNHIDRNNL TDGTRSDRSL
QGGNWRAGLV FAVSDDLSLY GQYSTSEDGV NDLISLNPAQ LNYDLTESKQ TELGLKQRFW
EGRGEWTLAA YHIVKKKLLV DDPITHEKQQ AGQQTSDGLE ASLELALPQQ WQVSANASLV
RAKYDEFDEM VAGVTQDRAG NRPSNVPRRT ANLWLTKGFG QQVEAGIGAR YVDDRYANTA
NTQRAPGYTV VDANIGWQLL PDVRLGLQIN NLFDREYVAS AFSGTQWIMG TPRSYFATVD
HSF
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