| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1919 |
|---|
| Symbol | |
|---|
| ID | 6110870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2148673 |
|---|
| End bp | 2149407 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641621714 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001748791 |
|---|
| Protein GI | 170721103 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.831773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.256849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC TTAGAGTGTC CGCGCTGCAC AAATACTACG GCGACAACCA TGTGCTCAAG
GGCGTCGACC TGAGCATCGA AGAGGGCGAG GTGGTAGCGA TCATCGGCCG CAGCGGCTCG
GGCAAAAGTA CCTTGTTGCG CACGCTCAAT GGCCTGGAGT CGATCAGCGA TGGCGTGATC
GAGGTGGACG GTGAATACCT CGATGCCGGC CGCGCTGACC TGCGTTCCCT GCGTCAGAAA
GTGGGCATGG TGTTCCAGCA GTTCAACCTG TTCCCGCACC TGAGCGTGGG CGAGAACGTG
ATGCTCGCGC CCCAGGTGGT GAAGAAGGCC AGCAGGGCCC AGGCGCGCCA ACTGGCTGAA
CAGATGCTGG CGCGGGTGGG CCTGGCGGAA AAATTCGATG CCTACCCCGA CCGGCTTTCC
GGTGGCCAGC AACAGCGGGT GGCGATCGCG AGGGCGCTGG CCATGTCGCC CAAGGTGCTG
CTGTGCGACG AGATCACCTC GGCGCTCGAC CCCGAACTGG TCAACGAGGT GTTGGGCGTG
GTGCGCCAGC TGGCCAGTGA AGGCATGACC CTGATCATGG TCACCCATGA GATGCGCTTT
GCCCGCGAAG TGGGCGATAA ACTGGTGTTC ATGCACCATG GCAAGGTGCA TGAAGTGGGT
AACCCGCGAG AAGTCTTTGC GGCACCGAAA ACGGCCGAAC TGGCCAATTT CATAGGCTCA
GTGGTATCGG CCTGA
|
|---|
| Protein sequence | MPLLRVSALH KYYGDNHVLK GVDLSIEEGE VVAIIGRSGS GKSTLLRTLN GLESISDGVI
EVDGEYLDAG RADLRSLRQK VGMVFQQFNL FPHLSVGENV MLAPQVVKKA SRAQARQLAE
QMLARVGLAE KFDAYPDRLS GGQQQRVAIA RALAMSPKVL LCDEITSALD PELVNEVLGV
VRQLASEGMT LIMVTHEMRF AREVGDKLVF MHHGKVHEVG NPREVFAAPK TAELANFIGS
VVSA
|
|---|
| |