| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1917 |
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| Symbol | |
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| ID | 6110868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2147373 |
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| End bp | 2148038 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621712 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001748789 |
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| Protein GI | 170721101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.182238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.18588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATG AATTCGACTT CGCCCCCGTG CTGGCCCAGG CCCCCCTATT GCTCAAGGGC
GCCTGGTTCA CCCTGCAGCT GACGGTGGTC GGCACCTTGC TGGGCGTGGC CATCGGCGTG
CTCGGCGCGG GGGTTCGCGC CTGGCGTGTG CGCCCATTCG ACATGCTGTT TGGTCTGTAT
GTGGAGCTGA TCCGTAACAC GCCCTTCATC GTCCAGCTGT TCTTCATCTT CTTCGGCCTG
CCGGCGCTGG GCATTCGCCT GACCGAGTGG CAGGCAGCGG TGCTGGCTAT GGTGATCAAC
CTGGGTGCCT ACTCCACCGA GATCATCAGG GCGGGTATTC AGGCCATTCC CAAGGGCCAG
CTGGAAGCTG CTGCAGCCCT GGCCATGAGC CGCTTCGAGG CGTTCCGTCA TGTGGTGTTG
CAGCCTGCCC TGGCCAAGGT ATGGCCGGCA CTGACGAGCC AGATCGTGAT CGTCATGCTC
GGCTCGGCGG TGTGTTCGCA AATCGCCACC GAGGAACTGT CGTTCGCCGC CAACTTCATC
CAGTCGCGCA ATTTCCGTGC ATTTGAAACC TACCTGCTGA CCACCGTGCT GTACCTGGTC
ATGGCCATCG CCTTGCGTCA ATTGCTGGCA TGGTTGGGGC AGCGCTTGCT GATGGGGAGA
CGCTGA
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| Protein sequence | MAYEFDFAPV LAQAPLLLKG AWFTLQLTVV GTLLGVAIGV LGAGVRAWRV RPFDMLFGLY
VELIRNTPFI VQLFFIFFGL PALGIRLTEW QAAVLAMVIN LGAYSTEIIR AGIQAIPKGQ
LEAAAALAMS RFEAFRHVVL QPALAKVWPA LTSQIVIVML GSAVCSQIAT EELSFAANFI
QSRNFRAFET YLLTTVLYLV MAIALRQLLA WLGQRLLMGR R
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